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  5. Zm00001e015907_P001

Zm00001e015907_P001 (Zm00001e015907)


Aliases : Zm00001e015907

Description : Pentatricopeptide repeat-containing protein At1g73400, mitochondrial OS=Arabidopsis thaliana (sp|q9fx35|pp117_arath : 572.0)


Gene families : OG0000142 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000142_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e015907_P001

Target Alias Description ECC score Gene Family Method Actions
AT1G52640 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Als_g15680 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g36532 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g11222 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g35745 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e013118_P001 Zm00001e013118 Pentatricopeptide repeat-containing protein At3g61360... 0.03 OrthoFinder output from all 47 species
Zm00001e026896_P001 Zm00001e026896 Pentatricopeptide repeat-containing protein At3g62470,... 0.05 OrthoFinder output from all 47 species
Zm00001e036305_P001 Zm00001e036305 Pentatricopeptide repeat-containing protein At3g25210,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 380 439
IPR002885 Pentatricopeptide_repeat 221 246
IPR002885 Pentatricopeptide_repeat 250 298
IPR002885 Pentatricopeptide_repeat 322 370
No external refs found!