Aliases : Zm00001e015892
Description : Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana (sp|q9m1s3|arp1_arath : 101.0)
Gene families : OG0000717 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000717_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G78260 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.03 | OrthoFinder output from all 47 species | |
AT3G54770 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0019.g015267 | No alias | not classified & original description: CDS=1-609 | 0.02 | OrthoFinder output from all 47 species | |
Dac_g41124 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g00501 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os01g72834.1 | LOC_Os01g72834 | Probable RNA-binding protein ARP1 OS=Arabidopsis... | 0.07 | OrthoFinder output from all 47 species | |
LOC_Os02g51890.1 | LOC_Os02g51890 | Probable RNA-binding protein ARP1 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os03g17760.1 | LOC_Os03g17760 | Probable RNA-binding protein ARP1 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
Len_g15889 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e037573_P001 | Zm00001e037573 | Probable RNA-binding protein ARP1 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004518 | nuclease activity | IEP | HCCA |
MF | GO:0004519 | endonuclease activity | IEP | HCCA |
BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
BP | GO:0006308 | DNA catabolic process | IEP | HCCA |
MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | HCCA |
BP | GO:0009056 | catabolic process | IEP | HCCA |
BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
MF | GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity | IEP | HCCA |
MF | GO:0015020 | glucuronosyltransferase activity | IEP | HCCA |
MF | GO:0016757 | glycosyltransferase activity | IEP | HCCA |
MF | GO:0016758 | hexosyltransferase activity | IEP | HCCA |
MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
BP | GO:0019439 | aromatic compound catabolic process | IEP | HCCA |
BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | HCCA |
BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | HCCA |
BP | GO:0046700 | heterocycle catabolic process | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
BP | GO:1901361 | organic cyclic compound catabolic process | IEP | HCCA |
BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000504 | RRM_dom | 49 | 107 |
No external refs found! |