Zm00001e015817_P001 (Zm00001e015817)


Aliases : Zm00001e015817

Description : no hits & (original description: none)


Gene families : OG0000085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000085_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e015817_P001

Target Alias Description ECC score Gene Family Method Actions
Adi_g003400 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g004478 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g049959 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g086897 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g109380 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g113140 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g11483 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06277 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0579.g078279 No alias not classified & original description: CDS=29-1684 0.03 OrthoFinder output from all 47 species
Cba_g15480 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g24024 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.28G013700.1 Ceric.28G013700 not classified & original description: pacid=50569930... 0.02 OrthoFinder output from all 47 species
Dac_g10545 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g11362 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01030266001 No alias B2 protein OS=Daucus carota 0.02 OrthoFinder output from all 47 species
Gb_24772 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 91.7) 0.03 OrthoFinder output from all 47 species
Len_g23479 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g36163 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_15917g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp1g21920.1 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 92.4) 0.02 OrthoFinder output from all 47 species
Nbi_g02966 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g03607 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17982 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43606 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13486 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g13338 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04078 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g40954 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g068850.4.1 Solyc06g068850 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 87.4) 0.04 OrthoFinder output from all 47 species
Tin_g11154 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005672 transcription factor TFIIA complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR013989 Dev_and_cell_death_domain 171 292
No external refs found!