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  5. Zm00001e015713_P002

Zm00001e015713_P002 (Zm00001e015713)


Aliases : Zm00001e015713

Description : pre-40S ribosomal subunit assembly factor (RRP7)


Gene families : OG0005810 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005810_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e015713_P002

Target Alias Description ECC score Gene Family Method Actions
AT5G38720 No alias unknown protein; Has 13419 Blast hits to 9093 proteins... 0.11 OrthoFinder output from all 47 species
Aop_g11952 No alias pre-40S ribosomal subunit assembly factor *(RRP7) &... 0.04 OrthoFinder output from all 47 species
Cre01.g052200 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os02g49620.1 LOC_Os02g49620 pre-40S ribosomal subunit assembly factor (RRP7) 0.04 OrthoFinder output from all 47 species
Pir_g37743 No alias pre-40S ribosomal subunit assembly factor *(RRP7) &... 0.02 OrthoFinder output from all 47 species
Sam_g23617 No alias pre-40S ribosomal subunit assembly factor *(RRP7) &... 0.02 OrthoFinder output from all 47 species
Smo422020 No alias No description available 0.05 OrthoFinder output from all 47 species
Solyc02g089600.3.1 Solyc02g089600 pre-40S ribosomal subunit assembly factor (RRP7) 0.07 OrthoFinder output from all 47 species
Solyc03g046350.3.1 Solyc03g046350 pre-40S ribosomal subunit assembly factor (RRP7) 0.11 OrthoFinder output from all 47 species
Spa_g00938 No alias pre-40S ribosomal subunit assembly factor *(RRP7) &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0009891 positive regulation of biosynthetic process IEP HCCA
BP GO:0009893 positive regulation of metabolic process IEP HCCA
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010604 positive regulation of macromolecule metabolic process IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0031325 positive regulation of cellular metabolic process IEP HCCA
BP GO:0031328 positive regulation of cellular biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0032784 regulation of DNA-templated transcription elongation IEP HCCA
BP GO:0032786 positive regulation of DNA-templated transcription, elongation IEP HCCA
BP GO:0032968 positive regulation of transcription elongation by RNA polymerase II IEP HCCA
BP GO:0034243 regulation of transcription elongation by RNA polymerase II IEP HCCA
BP GO:0045893 positive regulation of DNA-templated transcription IEP HCCA
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0045944 positive regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051254 positive regulation of RNA metabolic process IEP HCCA
BP GO:1902680 positive regulation of RNA biosynthetic process IEP HCCA
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR024326 RRP7_C 254 377
No external refs found!