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  3. Zea mays
  4. Sequence
  5. Zm00001e015706_P001

Zm00001e015706_P001 (BIM1, Zm00001e015706)


Aliases : BIM1, Zm00001e015706

Description : transcription factor (bHLH)


Gene families : OG0002413 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002413_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e015706_P001
Cluster HCCA: Cluster_305

Target Alias Description ECC score Gene Family Method Actions
Adi_g053075 BIM1 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g075802 BIM2 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g109987 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g17647 BIM1 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03454 BIM1 bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g05232 BIM1 bHLH-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Len_g22747 BIM1 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g38178 BIM2 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g11523 BIM1 bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g06967 BIM1 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g046570.4.1 Solyc03g046570 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc03g114720.3.1 BIM1, Solyc03g114720 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Spa_g24342 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g26053 BIM1 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 173 222
No external refs found!