Zm00001e015701_P001 (OBP4, Zm00001e015701)

Aliases : OBP4, Zm00001e015701

Description : transcription factor (DOF)

Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e015701_P001
Cluster	HCCA: Cluster_146

Target	Alias	Description	ECC score	Gene Family Method
AT1G07640	OBP2	Dof-type zinc finger DNA-binding family protein	0.05	OrthoFinder output from all 47 species
AT2G28810	No alias	Dof-type zinc finger DNA-binding family protein	0.04	OrthoFinder output from all 47 species
Adi_g002851	OBP4	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene44031.t1	Aspi01Gene44031	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.22G032900.1	TMO6, Ceric.22G032900	transcription factor *(DOF) & original description:...	0.02	OrthoFinder output from all 47 species
Dac_g40320	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g05583	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g07407	TMO6	transcription factor *(DOF) & original description: none	0.01	OrthoFinder output from all 47 species
Ehy_g04770	CDF3	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g28279	No alias	transcription factor *(DOF) & original description: none	0.01	OrthoFinder output from all 47 species
GSVIVT01016887001	ADOF1, DOF1	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
GSVIVT01019969001	CDF1	RNA biosynthesis.transcriptional activation.C2C2...	0.05	OrthoFinder output from all 47 species
LOC_Os03g60630.1	LOC_Os03g60630	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Len_g20781	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Solyc09g010680.3.1	Solyc09g010680	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Solyc10g086440.2.1	DOF2.4,...	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
Solyc11g066050.1.1	Solyc11g066050	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Spa_g09440	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e007228_P002	Zm00001e007228	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Zm00001e029641_P001	OBP3, Zm00001e029641	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Zm00001e041444_P001	Zm00001e041444	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	49	104

External Links

No external refs found!

Zm00001e015701_P001 (OBP4, Zm00001e015701)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation