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  5. Zm00001e015665_P001

Zm00001e015665_P001 (FIM5, FIM2, Zm00001e015665)


Aliases : FIM5, FIM2, Zm00001e015665

Description : fimbrin actin-crosslinking factor


Gene families : OG0001639 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001639_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e015665_P001

Target Alias Description ECC score Gene Family Method Actions
LOC_Os02g37580.1 FIM5, FIM2,... fimbrin actin-crosslinking factor 0.07 OrthoFinder output from all 47 species
Mp1g27470.1 FIM5, FIM2 fimbrin actin-crosslinking factor 0.03 OrthoFinder output from all 47 species
Msp_g29201 FIM5, FIM2 fimbrin actin-crosslinking factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11217 No alias fimbrin actin-crosslinking factor & original description: none 0.02 OrthoFinder output from all 47 species
Smo233006 FIM5, FIM2 Cytoskeleton.microfilament network.actin... 0.02 OrthoFinder output from all 47 species
Solyc07g049600.4.1 FIM5, FIM2,... fimbrin actin-crosslinking factor 0.03 OrthoFinder output from all 47 species
Tin_g05161 FIM5, FIM2 fimbrin acTin-crosslinking factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e014968_P001 FIM5, FIM2,... fimbrin actin-crosslinking factor 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
InterPro domains Description Start Stop
IPR001715 CH_dom 524 625
IPR001715 CH_dom 399 501
IPR001715 CH_dom 272 373
IPR001715 CH_dom 154 241
No external refs found!