Aliases : NGA3, Zm00001e015451
Description : transcription factor (RAV/NGATHA)
Gene families : OG0000941 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000941_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT2G36080 | No alias | AP2/B3-like transcriptional factor family protein | 0.04 | OrthoFinder output from all 47 species | |
Adi_g058440 | EDF3 | AP2-RAV-type transcription factor *(EDF) & original... | 0.02 | OrthoFinder output from all 47 species | |
Als_g08696 | EDF4, RAV1 | AP2-RAV-type transcription factor *(EDF) & original... | 0.07 | OrthoFinder output from all 47 species | |
Aob_g11266 | EDF4, RAV1 | AP2-RAV-type transcription factor *(EDF) & original... | 0.02 | OrthoFinder output from all 47 species | |
Dac_g43760 | EDF2, AtRAV2,... | AP2-RAV-type transcription factor *(EDF) & original... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01033902001 | No alias | RNA biosynthesis.transcriptional activation.B3... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os12g06080.1 | LOC_Os12g06080 | transcription factor (RAV/NGATHA) | 0.04 | OrthoFinder output from all 47 species | |
Nbi_g11598 | EDF4, RAV1 | AP2-RAV-type transcription factor *(EDF) & original... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | HCCA |
MF | GO:0004568 | chitinase activity | IEP | HCCA |
BP | GO:0006022 | aminoglycan metabolic process | IEP | HCCA |
BP | GO:0006026 | aminoglycan catabolic process | IEP | HCCA |
BP | GO:0006030 | chitin metabolic process | IEP | HCCA |
BP | GO:0006032 | chitin catabolic process | IEP | HCCA |
BP | GO:0006040 | amino sugar metabolic process | IEP | HCCA |
BP | GO:0009056 | catabolic process | IEP | HCCA |
BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | HCCA |
BP | GO:0016998 | cell wall macromolecule catabolic process | IEP | HCCA |
BP | GO:0044036 | cell wall macromolecule metabolic process | IEP | HCCA |
BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
BP | GO:0046348 | amino sugar catabolic process | IEP | HCCA |
BP | GO:1901071 | glucosamine-containing compound metabolic process | IEP | HCCA |
BP | GO:1901072 | glucosamine-containing compound catabolic process | IEP | HCCA |
BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | HCCA |
BP | GO:1901136 | carbohydrate derivative catabolic process | IEP | HCCA |
BP | GO:1901565 | organonitrogen compound catabolic process | IEP | HCCA |
BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003340 | B3_DNA-bd | 101 | 201 |
No external refs found! |