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  5. Zm00001e015355_P002

Zm00001e015355_P002 (ATHAM3, HAM3, LOM3,...)


Aliases : ATHAM3, HAM3, LOM3, Zm00001e015355

Description : transcription factor (GRAS)


Gene families : OG0002830 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002830_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e015355_P002

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00228020 ATHAM3, HAM3,... RNA biosynthesis.transcriptional activation.GRAS... 0.02 OrthoFinder output from all 47 species
AT3G60630 HAM2, LOM2, ATHAM2 GRAS family transcription factor 0.08 OrthoFinder output from all 47 species
AT4G00150 ATHAM3, HAM3, LOM3 GRAS family transcription factor 0.04 OrthoFinder output from all 47 species
Adi_g106923 No alias GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g107878 ATHAM3, HAM3, LOM3 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g110644 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17369 ATHAM3, HAM3, LOM3 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene11870.t1 ATHAM3, HAM3,... GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.08G011800.1 HAM2, LOM2,... GRAS-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g12093 ATHAM3, HAM3, LOM3 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01019006001 No alias RNA biosynthesis.transcriptional activation.GRAS... 0.03 OrthoFinder output from all 47 species
Nbi_g02436 ATHAM3, HAM3, LOM3 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g23184 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g35180 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g18422 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Smo56382 PAT1 RNA biosynthesis.transcriptional activation.GRAS... 0.02 OrthoFinder output from all 47 species
Solyc01g090950.4.1 ATHAM3, HAM3,... transcription factor (GRAS) 0.05 OrthoFinder output from all 47 species
Solyc08g078800.1.1 ATHAM3, HAM3,... transcription factor (GRAS) 0.1 OrthoFinder output from all 47 species
Spa_g23136 ATHAM3, HAM3, LOM3 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
BP GO:0030259 lipid glycosylation IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR005202 TF_GRAS 349 705
No external refs found!