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Aliases : Zm00001e015209
Description : transcription factor (TCP). CHE circadian clock repression factor
Gene families : OG0000443 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000443_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e015209_P001 | |
| Cluster | HCCA: Cluster_23 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00029p00040760 | evm_27.TU.AmTr_v1... | Multi-process regulation.circadian clock.morning element... | 0.02 | OrthoFinder output from all 47 species | |
| AT3G47620 | AtTCP14, TCP14 | TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g007407 | AT-TCP20, TCP20,... | circAdian clock activation factor *(TCP20) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g088074 | No alias | TCP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g06733 | No alias | TCP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene43392.t1 | Aspi01Gene43392 | TCP-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene65051.t1 | AT-TCP20, TCP20,... | circadian clock activation factor *(TCP20) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0013.g013244 | No alias | TCP-type transcription factor & original description: CDS=1-1674 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0090.g042743 | AtTCP14, TCP14 | TCP-type transcription factor & original description: CDS=1-1476 | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g33873 | AT-TCP20, TCP20,... | TCP-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g06407 | No alias | TCP-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g07622 | AtTCP14, TCP14 | TCP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01008023001 | No alias | RNA biosynthesis.transcriptional activation.TCP... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01023283001 | No alias | RNA biosynthesis.transcriptional activation.TCP... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01026145001 | No alias | Multi-process regulation.circadian clock.morning element... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g69980.1 | AT-TCP20, TCP20,... | transcription factor (TCP). TCP20 circadian clock... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g42380.1 | LOC_Os02g42380 | transcription factor (TCP) | 0.1 | OrthoFinder output from all 47 species | |
| LOC_Os11g07460.1 | LOC_Os11g07460 | transcription factor (TCP) | 0.02 | OrthoFinder output from all 47 species | |
| MA_16752g0010 | No alias | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
| MA_635g0010 | AtTCP14, TCP14 | transcription factor (TCP) | 0.05 | OrthoFinder output from all 47 species | |
| Mp7g09490.1 | No alias | transcription factor (TCP) | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g02330 | No alias | TCP-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g05851 | No alias | TCP-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g01518 | No alias | TCP-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g03168 | No alias | TCP-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g07074 | No alias | TCP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g07139 | No alias | TCP-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g25570 | No alias | TCP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g25887 | AtTCP14, TCP14 | TCP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g40661 | No alias | circadian clock activation factor *(TCP20) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g00471 | AT-TCP20, TCP20,... | TCP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g02433 | AtTCP14, TCP14 | TCP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g06765 | No alias | TCP-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g06948 | AT-TCP20, TCP20,... | circadian clock activation factor *(TCP20) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0044.g013125 | AtTCP14, TCP14 | TCP-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0069.g016510 | No alias | TCP-type transcription factor & original description: CDS=1-2211 | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0175.g024570 | No alias | TCP-type transcription factor & original description: CDS=1-1014 | 0.05 | OrthoFinder output from all 47 species | |
| Smo438214 | No alias | RNA biosynthesis.transcriptional activation.TCP... | 0.04 | OrthoFinder output from all 47 species | |
| Smo441321 | No alias | RNA biosynthesis.transcriptional activation.TCP... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc03g006800.1.1 | Solyc03g006800 | transcription factor (TCP) | 0.06 | OrthoFinder output from all 47 species | |
| Solyc03g116320.3.1 | AtTCP14, TCP14,... | transcription factor (TCP) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc05g007420.2.1 | Solyc05g007420 | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g070900.3.1 | AtTCP14, TCP14,... | transcription factor (TCP) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc08g080150.1.1 | Solyc08g080150 | transcription factor (TCP) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc09g008030.1.1 | Solyc09g008030 | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g16929 | No alias | TCP-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e010190_P001 | Zm00001e010190 | transcription factor (TCP) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e036117_P001 | AtTCP14, TCP14,... | transcription factor (TCP) | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR017887 | TF_TCP_subgr | 53 | 138 |
| No external refs found! |