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  5. Zm00001e015143_P001

Zm00001e015143_P001 (LSH4, Zm00001e015143)


Aliases : LSH4, Zm00001e015143

Description : Protein G1-like3 OS=Oryza sativa subsp. indica (sp|b8ah02|g1l3_orysi : 223.0)


Gene families : OG0001118 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001118_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e015143_P001

Target Alias Description ECC score Gene Family Method Actions
AT3G23290 LSH4 No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01023521001 No alias Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4... 0.02 OrthoFinder output from all 47 species
GSVIVT01028348001 LSH3 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3... 0.05 OrthoFinder output from all 47 species
LOC_Os01g61310.1 LSH6, LOC_Os01g61310 Protein G1-like7 OS=Oryza sativa subsp. indica... 0.05 OrthoFinder output from all 47 species
LOC_Os02g07030.1 LSH4, LOC_Os02g07030 Protein G1-like1 OS=Oryza sativa subsp. japonica... 0.08 OrthoFinder output from all 47 species
LOC_Os02g41460.1 LSH4, LOC_Os02g41460 Protein G1-like3 OS=Oryza sativa subsp. indica... 0.05 OrthoFinder output from all 47 species
LOC_Os06g46030.1 LSH4, LOC_Os06g46030 Protein G1-like2 OS=Oryza sativa subsp. indica... 0.03 OrthoFinder output from all 47 species
LOC_Os07g04670.1 LSH6, LOC_Os07g04670 Protein G1 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os10g33780.1 LSH4, LOC_Os10g33780 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3... 0.03 OrthoFinder output from all 47 species
Pir_g20213 LSH4 plant-specific ALOG-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0149.g023275 LSH4 plant-specific ALOG-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Solyc06g083860.2.1 LSH3, Solyc06g083860 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3... 0.06 OrthoFinder output from all 47 species
Solyc07g150147.1.1 LSH10, Solyc07g150147 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10... 0.04 OrthoFinder output from all 47 species
Solyc10g007310.1.1 LSH10, Solyc10g007310 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10... 0.02 OrthoFinder output from all 47 species
Zm00001e013711_P001 LSH4, Zm00001e013711 Protein G1-like2 OS=Oryza sativa subsp. indica... 0.04 OrthoFinder output from all 47 species
Zm00001e016177_P002 LSH4, Zm00001e016177 Protein G1-like6 OS=Oryza sativa subsp. indica... 0.04 OrthoFinder output from all 47 species
Zm00001e027283_P001 LSH6, Zm00001e027283 Protein G1-like8 OS=Oryza sativa subsp. japonica... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR006936 ALOG_dom 38 157
No external refs found!