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  5. Zm00001e015136_P002

Zm00001e015136_P002 (PRT1, Zm00001e015136)


Aliases : PRT1, Zm00001e015136

Description : type-II-residues E3 ubiquitin ligase (PRT1)


Gene families : OG0002242 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002242_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e015136_P002
Cluster HCCA: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
Adi_g103075 PRT1 type-II-residues E3 ubiquitin ligase *(PRT1) & original... 0.01 OrthoFinder output from all 47 species
Aev_g07047 PRT1 type-II-residues E3 ubiquitin ligase *(PRT1) & original... 0.02 OrthoFinder output from all 47 species
Aev_g18134 PRT1 type-II-residues E3 ubiquitin ligase *(PRT1) & original... 0.04 OrthoFinder output from all 47 species
Aob_g08275 PRT1 type-II-residues E3 ubiquitin ligase *(PRT1) & original... 0.02 OrthoFinder output from all 47 species
Aop_g11059 PRT1 type-II-residues E3 ubiquitin ligase *(PRT1) & original... 0.02 OrthoFinder output from all 47 species
Cba_g16445 PRT1 type-II-residues E3 ubiquitin ligase *(PRT1) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g05666 PRT1 type-II-residues E3 ubiquitin ligase *(PRT1) & original... 0.03 OrthoFinder output from all 47 species
LOC_Os02g40810.1 PRT1, LOC_Os02g40810 type-II-residues E3 ubiquitin ligase (PRT1) 0.04 OrthoFinder output from all 47 species
Pir_g38680 PRT1 type-II-residues E3 ubiquitin ligase *(PRT1) & original... 0.02 OrthoFinder output from all 47 species
Pir_g38681 PRT1 type-II-residues E3 ubiquitin ligase *(PRT1) & original... 0.02 OrthoFinder output from all 47 species
Pnu_g08311 PRT1 type-II-residues E3 ubiquitin ligase *(PRT1) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP HCCA
MF GO:0004620 phospholipase activity IEP HCCA
MF GO:0004629 phospholipase C activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000433 Znf_ZZ 277 317
No external refs found!