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  5. Zm00001e015079_P001

Zm00001e015079_P001 (ATAB2, Zm00001e015079)


Aliases : ATAB2, Zm00001e015079

Description : Protein TAB2 homolog, chloroplastic OS=Zea mays (sp|b4ftr7|atab2_maize : 593.0)


Gene families : OG0004008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004008_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e015079_P001
Cluster HCCA: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00103p00115980 ATAB2,... Protein TAB2 homolog, chloroplastic OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT3G08010 ATAB2 RNA binding 0.03 OrthoFinder output from all 47 species
Adi_g014503 ATAB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07833 ATAB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g09787 ATAB2 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Als_g22462 ATAB2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g04128 ATAB2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g04239 ATAB2 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g31544 ATAB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene49930.t1 ATAB2, Aspi01Gene49930 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene61714.t1 ATAB2, Aspi01Gene61714 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0050.g031031 ATAB2 not classified & original description: CDS=196-1422 0.02 OrthoFinder output from all 47 species
Cba_g03154 ATAB2 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ceric.21G068300.1 ATAB2, Ceric.21G068300 not classified & original description: pacid=50604093... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000622.21 No alias Protein TAB2 homolog, chloroplastic OS=Zea mays 0.02 OrthoFinder output from all 47 species
Cre17.g702500 ATAB2 Protein TAB2 homolog, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Dac_g18139 ATAB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g14997 ATAB2 not classified & original description: none 0.13 OrthoFinder output from all 47 species
Dcu_g18747 ATAB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04344 ATAB2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g16983 ATAB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g05805 ATAB2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01032129001 ATAB2 Protein TAB2 homolog, chloroplastic OS=Arabidopsis thaliana 0.12 OrthoFinder output from all 47 species
Gb_34984 ATAB2 Protein TAB2 homolog, chloroplastic OS=Arabidopsis... 0.09 OrthoFinder output from all 47 species
Gb_34986 ATAB2 Protein TAB2 homolog, chloroplastic OS=Oryza sativa... 0.06 OrthoFinder output from all 47 species
LOC_Os02g39740.1 ATAB2, LOC_Os02g39740 Protein TAB2 homolog, chloroplastic OS=Oryza sativa... 0.14 OrthoFinder output from all 47 species
Len_g43889 ATAB2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g01384 ATAB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g30744 ATAB2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
MA_10430622g0010 ATAB2 Protein TAB2 homolog, chloroplastic OS=Zea mays... 0.04 OrthoFinder output from all 47 species
Mp1g14850.1 ATAB2 Protein TAB2 homolog, chloroplastic OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Msp_g02016 ATAB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g00688 ATAB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g01898 ATAB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g05869 ATAB2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g02783 ATAB2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g10236 ATAB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12443 ATAB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03703 ATAB2 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ppi_g32398 ATAB2 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015277 ATAB2 not classified & original description: CDS=173-1390 0.09 OrthoFinder output from all 47 species
Sam_g10050 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc02g005200.4.1 ATAB2, Solyc02g005200 Protein TAB2 homolog, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g10068 ATAB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g00858 ATAB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10787 ATAB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR009472 Tab2-like 108 382
No external refs found!