Aliases : CSB3, CLB4, GCPE, HDS, ISPG, Zm00001e015046
Description : 4-hydroxy-3-methylbut-2-enyl diphosphate synthase
Gene families : OG0004404 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004404_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Zm00001e015046_P001 | |
Cluster | HCCA: Cluster_28 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00175p00057810 | CSB3, CLB4,... | Secondary metabolism.terpenoids.methylerythritol... | 0.07 | OrthoFinder output from all 47 species | |
AT5G60600 | CSB3, CLB4,... | 4-hydroxy-3-methylbut-2-enyl diphosphate synthase | 0.05 | OrthoFinder output from all 47 species | |
Aop_g14403 | CSB3, CLB4,... | 4-hydroxy-3-methylbut-2-enyl diphosphate synthase &... | 0.09 | OrthoFinder output from all 47 species | |
Azfi_s0155.g053656 | CSB3, CLB4,... | 4-hydroxy-3-methylbut-2-enyl diphosphate synthase &... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01025182001 | CSB3, CLB4,... | Secondary metabolism.terpenoids.methylerythritol... | 0.05 | OrthoFinder output from all 47 species | |
Gb_01895 | CSB3, CLB4,... | 4-hydroxy-3-methylbut-2-enyl diphosphate synthase | 0.04 | OrthoFinder output from all 47 species | |
Len_g16087 | CSB3, CLB4,... | 4-hydroxy-3-methylbut-2-enyl diphosphate synthase &... | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g05647 | CSB3, CLB4,... | 4-hydroxy-3-methylbut-2-enyl diphosphate synthase &... | 0.03 | OrthoFinder output from all 47 species | |
Mp5g09870.1 | CSB3, CLB4,... | 4-hydroxy-3-methylbut-2-enyl diphosphate synthase | 0.02 | OrthoFinder output from all 47 species | |
Pir_g09734 | CSB3, CLB4,... | 4-hydroxy-3-methylbut-2-enyl diphosphate synthase &... | 0.02 | OrthoFinder output from all 47 species | |
Solyc11g069380.2.1 | CSB3, CLB4,... | 4-hydroxy-3-methylbut-2-enyl diphosphate synthase | 0.03 | OrthoFinder output from all 47 species | |
Tin_g02819 | CSB3, CLB4,... | 4-hydroxy-3-methylbut-2-enyl diphosphate synthase &... | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0016114 | terpenoid biosynthetic process | IEA | Interproscan |
MF | GO:0046429 | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity | IEA | Interproscan |
BP | GO:0055114 | obsolete oxidation-reduction process | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006081 | cellular aldehyde metabolic process | IEP | HCCA |
BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
BP | GO:0006090 | pyruvate metabolic process | IEP | HCCA |
BP | GO:0006644 | phospholipid metabolic process | IEP | HCCA |
BP | GO:0008654 | phospholipid biosynthetic process | IEP | HCCA |
BP | GO:0009240 | isopentenyl diphosphate biosynthetic process | IEP | HCCA |
MF | GO:0015399 | primary active transmembrane transporter activity | IEP | HCCA |
MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
MF | GO:0016726 | oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor | IEP | HCCA |
MF | GO:0016887 | ATP hydrolysis activity | IEP | HCCA |
MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | HCCA |
BP | GO:0019288 | isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | IEP | HCCA |
BP | GO:0019637 | organophosphate metabolic process | IEP | HCCA |
BP | GO:0019682 | glyceraldehyde-3-phosphate metabolic process | IEP | HCCA |
BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
MF | GO:0022804 | active transmembrane transporter activity | IEP | HCCA |
BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | HCCA |
MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | HCCA |
BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
BP | GO:0046490 | isopentenyl diphosphate metabolic process | IEP | HCCA |
BP | GO:0050992 | dimethylallyl diphosphate biosynthetic process | IEP | HCCA |
BP | GO:0050993 | dimethylallyl diphosphate metabolic process | IEP | HCCA |
MF | GO:0051745 | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity | IEP | HCCA |
BP | GO:0090407 | organophosphate biosynthetic process | IEP | HCCA |
MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR004588 | IspG_bac-typ | 92 | 734 |
No external refs found! |