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  5. Zm00001e014968_P001

Zm00001e014968_P001 (FIM5, FIM2, Zm00001e014968)


Aliases : FIM5, FIM2, Zm00001e014968

Description : fimbrin actin-crosslinking factor


Gene families : OG0001639 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001639_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e014968_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00055p00193060 FIM5, FIM2,... Cytoskeleton.microfilament network.actin... 0.05 OrthoFinder output from all 47 species
Aev_g01348 FIM5, FIM2 fimbrin actin-crosslinking factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g19621 FIM1, ATFIM1 fimbrin actin-crosslinking factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g11441 No alias fimbrin actin-crosslinking factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g15891 No alias fimbrin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G006300.1 FIM1, ATFIM1,... fimbrin actin-crosslinking factor & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000881.32 No alias Cytoskeleton.microfilament network.actin... 0.02 OrthoFinder output from all 47 species
GSVIVT01037750001 FIM5, FIM2 Cytoskeleton.microfilament network.actin... 0.03 OrthoFinder output from all 47 species
LOC_Os01g33080.1 LOC_Os01g33080 fimbrin actin-crosslinking factor 0.03 OrthoFinder output from all 47 species
LOC_Os02g37580.1 FIM5, FIM2,... fimbrin actin-crosslinking factor 0.1 OrthoFinder output from all 47 species
MA_9903969g0010 No alias fimbrin actin-crosslinking factor 0.02 OrthoFinder output from all 47 species
Msp_g29201 FIM5, FIM2 fimbrin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g04544 FIM5, FIM2 fimbrin actin-crosslinking factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000526 No alias fimbrin actin-crosslinking factor & original... 0.03 OrthoFinder output from all 47 species
Solyc07g049600.4.1 FIM5, FIM2,... fimbrin actin-crosslinking factor 0.07 OrthoFinder output from all 47 species
Zm00001e015665_P001 FIM5, FIM2,... fimbrin actin-crosslinking factor 0.04 OrthoFinder output from all 47 species
Zm00001e023425_P001 FIM5, FIM2,... fimbrin actin-crosslinking factor 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR001715 CH_dom 522 622
IPR001715 CH_dom 275 374
IPR001715 CH_dom 399 501
IPR001715 CH_dom 129 240
No external refs found!