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  5. Zm00001e014497_P001

Zm00001e014497_P001 (ABCG40, PDR12,...)


Aliases : ABCG40, PDR12, ATABCG40, ATPDR12, Zm00001e014497

Description : ABC transporter G family member 39 OS=Oryza sativa subsp. japonica (sp|q8gu88|ab39g_orysj : 171.0)


Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e014497_P001
Cluster HCCA: Cluster_139

Target Alias Description ECC score Gene Family Method Actions
Adi_g034248 PDR4, ATPDR4 subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g055702 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g21905 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g16447 ABCG40, PDR12,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g18617 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene36052.t1 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene72851.t1 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g10025 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.19G065500.1 PDR11, ATPDR11,... subfamily ABCG transporter & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.19G066000.1 ABCG40, PDR12,... subfamily ABCG transporter & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g22063 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g38790 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01031314001 PIS1, ABCG37,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
MA_124091g0010 ABCG40, PDR12,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
MA_12965g0010 ABCG40, PDR12,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
MA_38272g0010 ATPDR7, PDR7 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
MA_949447g0010 ABCG40, PDR12,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Mp1g25350.1 ATPDR7, PDR7 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013064 ABCG40, PDR12,... subfamily ABCG transporter & original description: CDS=213-3857 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0214.g026014 ATPDR3, PDR3 subfamily ABCG transporter & original description: CDS=1-2877 0.03 OrthoFinder output from all 47 species
Tin_g12263 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 104 155
IPR003439 ABC_transporter-like_ATP-bd 10 100
No external refs found!