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  5. Zm00001e014107_P001

Zm00001e014107_P001 (RPT3, Zm00001e014107)


Aliases : RPT3, Zm00001e014107

Description : regulatory component RPT3 of 26S proteasome


Gene families : OG0002973 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002973_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e014107_P001
Cluster HCCA: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
AT5G58290 RPT3 regulatory particle triple-A ATPase 3 0.03 OrthoFinder output from all 47 species
Adi_g018982 RPT3 regulatory component *(RPT3) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Adi_g077047 RPT3 regulatory component *(RPT3) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Aop_g00613 RPT3 regulatory component *(RPT3) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Aop_g02515 RPT3 regulatory component *(RPT3) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00022075.46 RPT3 26S proteasome regulatory subunit 6B homolog... 0.04 OrthoFinder output from all 47 species
Cre09.g402450 RPT3 Protein degradation.26S proteasome.regulatory... 0.06 OrthoFinder output from all 47 species
LOC_Os02g21970.1 RPT3, LOC_Os02g21970 regulatory component RPT3 of 26S proteasome 0.05 OrthoFinder output from all 47 species
Mp8g10830.1 RPT3 regulatory component RPT3 of 26S proteasome 0.07 OrthoFinder output from all 47 species
Sam_g35578 No alias regulatory component *(RPT3) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Smo180600 RPT3 Protein degradation.26S proteasome.regulatory... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
CC GO:0008250 oligosaccharyltransferase complex IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 258 391
IPR041569 AAA_lid_3 414 456
IPR032501 Prot_ATP_ID_OB_C 145 200
No external refs found!