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  5. Zm00001e014032_P001

Zm00001e014032_P001 (Zm00001e014032)


Aliases : Zm00001e014032

Description : regulatory component RPT4 of 26S proteasome


Gene families : OG0004670 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004670_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e014032_P001

Target Alias Description ECC score Gene Family Method Actions
AT1G45000 No alias AAA-type ATPase family protein 0.04 OrthoFinder output from all 47 species
AT5G43010 RPT4A regulatory particle triple-A ATPase 4A 0.1 OrthoFinder output from all 47 species
Adi_g060306 RPT4A regulatory component *(RPT4) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Aev_g05319 RPT4A regulatory component *(RPT4) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Als_g09965 No alias regulatory component *(RPT4) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Aop_g08467 No alias regulatory component *(RPT4) of 26S proteasome &... 0.06 OrthoFinder output from all 47 species
Azfi_s0037.g025873 No alias regulatory component *(RPT4) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Ceric.04G052100.1 Ceric.04G052100 regulatory component *(RPT4) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000718.6 No alias Protein degradation.26S proteasome.regulatory... 0.08 OrthoFinder output from all 47 species
Cre17.g710150 No alias Protein degradation.26S proteasome.regulatory... 0.13 OrthoFinder output from all 47 species
Dac_g07452 No alias regulatory component *(RPT4) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Dcu_g05314 RPT4A regulatory component *(RPT4) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Dcu_g05442 RPT4A regulatory component *(RPT4) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
GSVIVT01023828001 No alias Protein degradation.26S proteasome.regulatory... 0.05 OrthoFinder output from all 47 species
Gb_31524 No alias regulatory component RPT4 of 26S proteasome 0.06 OrthoFinder output from all 47 species
LOC_Os02g10640.1 LOC_Os02g10640 regulatory component RPT4 of 26S proteasome 0.06 OrthoFinder output from all 47 species
LOC_Os06g40560.1 LOC_Os06g40560 regulatory component RPT4 of 26S proteasome 0.05 OrthoFinder output from all 47 species
Len_g03228 RPT4A regulatory component *(RPT4) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
MA_137771g0010 No alias regulatory component RPT4 of 26S proteasome 0.02 OrthoFinder output from all 47 species
Mp7g14270.1 No alias regulatory component RPT4 of 26S proteasome 0.11 OrthoFinder output from all 47 species
Ore_g06165 RPT4A regulatory component *(RPT4) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Sam_g07453 No alias regulatory component *(RPT4) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Smo171164 RPT4A Protein degradation.26S proteasome.regulatory... 0.03 OrthoFinder output from all 47 species
Solyc01g109940.3.1 Solyc01g109940 regulatory component RPT4 of 26S proteasome 0.12 OrthoFinder output from all 47 species
Spa_g06890 No alias regulatory component *(RPT4) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Tin_g16778 RPT4A regulatory component *(RPT4) of 26S proteasome &... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
CC GO:0008303 caspase complex IEP HCCA
MF GO:0008312 7S RNA binding IEP HCCA
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
MF GO:0019781 NEDD8 activating enzyme activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
CC GO:0042765 GPI-anchor transamidase complex IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0045116 protein neddylation IEP HCCA
CC GO:0048500 signal recognition particle IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 177 310
IPR041569 AAA_lid_3 333 376
IPR032501 Prot_ATP_ID_OB_C 64 119
No external refs found!