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  5. Zm00001e013933_P001

Zm00001e013933_P001 (LYC, Zm00001e013933)


Aliases : LYC, Zm00001e013933

Description : lycopene beta cyclase (LCY-b)


Gene families : OG0004073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004073_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e013933_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00134510 LYC,... Secondary metabolism.terpenoids.terpenoid... 0.02 OrthoFinder output from all 47 species
AMTR_s00097p00060630 LYC,... Secondary metabolism.terpenoids.terpenoid... 0.03 OrthoFinder output from all 47 species
AT3G10230 LYC lycopene cyclase 0.05 OrthoFinder output from all 47 species
Adi_g078784 LYC EC_5.5 intramolecular lyase & original description: none 0.02 OrthoFinder output from all 47 species
Cre08.g358538 LYC Secondary metabolism.terpenoids.terpenoid... 0.04 OrthoFinder output from all 47 species
LOC_Os02g09750.1 LYC, LOC_Os02g09750 lycopene beta cyclase (LCY-b) 0.11 OrthoFinder output from all 47 species
Sam_g14458 No alias EC_5.5 intramolecular lyase & original description: none 0.03 OrthoFinder output from all 47 species
Smo266613 LYC Secondary metabolism.terpenoids.terpenoid... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP HCCA
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0098809 nitrite reductase activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!