Zm00001e013853_P001 (KNAT3, Zm00001e013853)

Aliases : KNAT3, Zm00001e013853

Description : transcription factor (KNOX)

Gene families : OG0000252 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000252_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e013853_P001

Target	Alias	Description	ECC score	Gene Family Method
Adi_g017500	KNAT3	KNOX-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g017501	KNAT4	KNOX-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Als_g31921	KNAT4	KNOX-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g06749	KNAT3	KNOX-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g03972	BP, BP1, KNAT1	KNOX-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g04678	KNAT3	KNOX-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01012897001	KNAT3	RNA biosynthesis.transcriptional activation.HB...	0.02	OrthoFinder output from all 47 species
LOC_Os02g08544.1	KNAT3, LOC_Os02g08544	transcription factor (KNOX)	0.09	OrthoFinder output from all 47 species
LOC_Os08g19650.1	KNAT3, LOC_Os08g19650	transcription factor (KNOX)	0.07	OrthoFinder output from all 47 species
MA_10428446g0010	BP, BP1, KNAT1	transcription factor (KNOX)	0.03	OrthoFinder output from all 47 species
Ore_g31221	KNAT4	KNOX-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g20569	KNAT3	KNOX-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g10499	BUM1, SHL, STM,...	KNOX-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0250.g026748	KNAT3	KNOX-type transcription factor & original description: CDS=1-885	0.02	OrthoFinder output from all 47 species
Solyc04g077210.3.1	BP, BP1, KNAT1,...	transcription factor (KNOX)	0.03	OrthoFinder output from all 47 species
Spa_g22911	KNAT3	KNOX-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e017489_P001	KNAT6, KNAT6L,...	transcription factor (KNOX)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000159	protein phosphatase type 2A complex	IEP	HCCA
CC	GO:0005783	endoplasmic reticulum	IEP	HCCA
BP	GO:0006457	protein folding	IEP	HCCA
BP	GO:0007165	signal transduction	IEP	HCCA
CC	GO:0008287	protein serine/threonine phosphatase complex	IEP	HCCA
MF	GO:0019208	phosphatase regulator activity	IEP	HCCA
MF	GO:0019888	protein phosphatase regulator activity	IEP	HCCA
MF	GO:0030234	enzyme regulator activity	IEP	HCCA
MF	GO:0051082	unfolded protein binding	IEP	HCCA
MF	GO:0098772	molecular function regulator activity	IEP	HCCA
CC	GO:1903293	phosphatase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005540	KNOX1	42	79
IPR005539	ELK_dom	204	225
IPR008422	Homeobox_KN_domain	244	283
IPR005541	KNOX2	101	147

External Links

No external refs found!

Zm00001e013853_P001 (KNAT3, Zm00001e013853)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation