Zm00001e013844_P002 (RR12, ARR12, Zm00001e013844)


Aliases : RR12, ARR12, Zm00001e013844

Description : B-type cytokinin ARR response activator. transcription factor (ARR-B)


Gene families : OG0000124 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000124_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e013844_P002

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00251530 evm_27.TU.AmTr_v1... Multi-process regulation.circadian clock.evening element... 0.02 OrthoFinder output from all 47 species
AMTR_s00049p00081480 ARR11,... RNA biosynthesis.transcriptional activation.ARR-B... 0.02 OrthoFinder output from all 47 species
AT2G40970 MYBC1 Homeodomain-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G62670 RR20, MEE41, ARR20 response regulator 20 0.03 OrthoFinder output from all 47 species
Adi_g015963 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g054623 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g25103 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.02 OrthoFinder output from all 47 species
Ala_g02179 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g44133 RR2, ARR2 subgroup ARR-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g13806 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene31778.t2 RR12, ARR12,... subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene50562.t1 Aspi01Gene50562 component *(LUX) of circadian clock Evening complex (EC)... 0.05 OrthoFinder output from all 47 species
Cba_g57194 RR14, ARR14 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G046400.1 ARR11, Ceric.04G046400 subgroup ARR-B transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.31G008400.1 Ceric.31G008400 subgroup ARR-B transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.39G052700.1 MYBC1, Ceric.39G052700 MYB-RELATED transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Dcu_g39028 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g47938 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g51493 RR14, ARR14 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g12820 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g00840 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13817 No alias component *(LUX) of circadian clock Evening complex (EC)... 0.04 OrthoFinder output from all 47 species
GSVIVT01007549001 ARR11 RNA biosynthesis.transcriptional activation.ARR-B... 0.03 OrthoFinder output from all 47 species
GSVIVT01010626001 ARR10, RR10 RNA biosynthesis.transcriptional activation.ARR-B... 0.02 OrthoFinder output from all 47 species
GSVIVT01029177001 ARR10, RR10 RNA biosynthesis.transcriptional activation.ARR-B... 0.04 OrthoFinder output from all 47 species
Gb_27151 ARR1, RR1 B-type cytokinin ARR response activator. transcription... 0.02 OrthoFinder output from all 47 species
Gb_32182 ARR1, RR1 B-type cytokinin ARR response activator. transcription... 0.03 OrthoFinder output from all 47 species
Gb_37200 ARR1, RR1 B-type cytokinin ARR response activator. transcription... 0.03 OrthoFinder output from all 47 species
Lfl_g08772 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g22323 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.02 OrthoFinder output from all 47 species
Lfl_g28555 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_7459g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_92689g0020 RR14, ARR14 B-type cytokinin ARR response activator. transcription... 0.03 OrthoFinder output from all 47 species
Msp_g15114 MYBC1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g15649 ARR11 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g25181 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g35598 ARR1, RR1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g06158 RR12, ARR12 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18795 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g20473 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.02 OrthoFinder output from all 47 species
Pir_g20141 RR12, ARR12 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05145 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.02 OrthoFinder output from all 47 species
Ppi_g05219 RR12, ARR12 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011863 MYBC1 not classified & original description: CDS=1-1491 0.02 OrthoFinder output from all 47 species
Smo55684 ARR11 RNA biosynthesis.transcriptional activation.ARR-B... 0.03 OrthoFinder output from all 47 species
Solyc07g005140.4.1 RR12, ARR12,... B-type cytokinin ARR response activator. transcription... 0.04 OrthoFinder output from all 47 species
Solyc10g078310.2.1 Solyc10g078310 Transcription factor MYBC1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g02524 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g06387 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g24857 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.02 OrthoFinder output from all 47 species
Spa_g46548 ARR11 subgroup ARR-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g01192 ARR11 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g01214 RR12, ARR12 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g28299 RR12, ARR12 subgroup ARR-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e016123_P001 RR12, ARR12,... B-type cytokinin ARR response activator. transcription... 0.02 OrthoFinder output from all 47 species
Zm00001e018507_P001 LUX, PCL1, Zm00001e018507 component LUX of circadian clock Evening complex (EC) 0.02 OrthoFinder output from all 47 species
Zm00001e036325_P002 RR12, ARR12,... B-type cytokinin ARR response activator. transcription... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001789 Sig_transdc_resp-reg_receiver 28 137
IPR001005 SANT/Myb 213 263
No external refs found!