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  5. Zm00001e013811_P001

Zm00001e013811_P001 (Zm00001e013811)


Aliases : Zm00001e013811

Description : transcription factor (bHLH)


Gene families : OG0000875 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000875_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e013811_P001
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00228070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
AMTR_s00019p00143370 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
AT1G70270 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 OrthoFinder output from all 47 species
AT2G47270 UPB1 sequence-specific DNA binding transcription... 0.03 OrthoFinder output from all 47 species
AT3G06590 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
Aop_g03187 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g05093 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene29507.t1 Aspi01Gene29507 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_136890g0010 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_96570g0010 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Msp_g05867 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g34499 GT140, IND1, IND, EDA33 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g44125 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e038315_P001 Zm00001e038315 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA

No InterPro domains available for this sequence

No external refs found!