- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : Zm00001e013777
Description : no hits & (original description: none)
Gene families : OG0005598 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005598_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e013777_P001 | |
| Cluster | HCCA: Cluster_137 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Aob_g05864 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00001094.38 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g07920.1 | LOC_Os02g07920 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g17854 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0036.g011599 | No alias | not classified & original description: CDS=1-1140 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g49681 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| CC | GO:0005681 | spliceosomal complex | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0008380 | RNA splicing | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| MF | GO:0061630 | ubiquitin protein ligase activity | IEP | HCCA |
| MF | GO:0061659 | ubiquitin-like protein ligase activity | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR018800 | PRCC | 181 | 439 |
| No external refs found! |