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  5. Zm00001e013672_P001

Zm00001e013672_P001 (Zm00001e013672)


Aliases : Zm00001e013672

Description : Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza sativa subsp. japonica (sp|q7xtv7|hip1_orysj : 106.0)


Gene families : OG0000374 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000374_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e013672_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00034p00079510 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AT5G42940 No alias RING/U-box superfamily protein 0.01 OrthoFinder output from all 47 species
Ala_g05939 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Als_g46122 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Aob_g02207 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Aspi01Gene01887.t1 Aspi01Gene01887 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene34272.t1 Aspi01Gene34272 RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Azfi_s0006.g009799 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Cba_g07264 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ceric.03G023000.1 Ceric.03G023000 RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Ceric.13G060600.1 Ceric.13G060600 RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ceric.1Z049900.1 Ceric.1Z049900 RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Dcu_g41510 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011840001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 47 species
GSVIVT01025655001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 47 species
GSVIVT01035519001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
LOC_Os01g47740.1 LOC_Os01g47740 Probable E3 ubiquitin-protein ligase ZFP1 OS=Oryza... 0.01 OrthoFinder output from all 47 species
MA_35916g0010 No alias Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... 0.01 OrthoFinder output from all 47 species
Msp_g15773 No alias regulatory E3 ubiquitin ligase (MREL/JUL) of microtubule... 0.01 OrthoFinder output from all 47 species
Ore_g10482 No alias regulatory E3 ubiquitin ligase (MREL/JUL) of microtubule... 0.03 OrthoFinder output from all 47 species
Pir_g30340 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Pnu_g18552 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0065.g015971 No alias not classified & original description: CDS=4183-6075 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0075.g017397 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0147.g023132 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Sam_g06274 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Sam_g52630 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Solyc04g078680.4.1 Solyc04g078680 Probable E3 ubiquitin-protein ligase RHG1A... 0.03 OrthoFinder output from all 47 species
Spa_g08582 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Spa_g26367 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 516 558
No external refs found!