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Aliases : Zm00001e013626
Description : G2-like GARP transcription factor
Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e013626_P001 | |
| Cluster | HCCA: Cluster_72 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00021p00013790 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.MYB... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00025p00151950 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.MYB... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00025p00224230 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.MYB... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00061p00096800 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.MYB... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00094p00028710 | APL, WDY,... | RNA biosynthesis.transcriptional activation.MYB... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00119p00095480 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.MYB... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00131p00063460 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.MYB... | 0.03 | OrthoFinder output from all 47 species | |
| AT3G13040 | No alias | myb-like HTH transcriptional regulator family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT4G04605 | No alias | No description available | 0.06 | OrthoFinder output from all 47 species | |
| Adi_g006433 | PHL1 | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g025722 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g057981 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g077902 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g080178 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g108057 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g08301 | No alias | transcription factor *(CLAUSA) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ala_g13279 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g14535 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g07061 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g12175 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g23706 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g04252 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g40224 | No alias | transcription factor *(CLAUSA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g40723 | No alias | transcription factor *(CLAUSA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g07032 | KAN4, ATS | KANADI-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g11654 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g29471 | No alias | transcription factor *(CLAUSA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene48429.t2 | Aspi01Gene48429 | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene65261.t1 | Aspi01Gene65261 | GARP subgroup PHL transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0035.g025591 | No alias | not classified & original description: CDS=203-1426 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0089.g042590 | No alias | not classified & original description: CDS=1-831 | 0.01 | OrthoFinder output from all 47 species | |
| Azfi_s0093.g043264 | PHR1, AtPHR1 | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0121.g046895 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g04663 | KAN, KAN1 | KANADI-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g09042 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g16380 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g24159 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.12G062400.1 | Ceric.12G062400 | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.21G027900.1 | Ceric.21G027900 | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.21G076700.1 | Ceric.21G076700 | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.22G040100.1 | Ceric.22G040100 | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.32G050900.1 | Ceric.32G050900 | transcription factor *(CLAUSA) & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.33G006800.1 | Ceric.33G006800 | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g08384 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g27691 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g31158 | KAN2 | KANADI-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g04642 | No alias | transcription factor *(CLAUSA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g04782 | No alias | transcription factor *(CLAUSA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g40682 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g16600 | No alias | transcription factor *(CLAUSA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g48326 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g03380 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g22986 | KAN4, ATS | KANADI-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g29468 | No alias | transcription factor *(CLAUSA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01005342001 | No alias | RNA biosynthesis.transcriptional activation.MYB... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01009589001 | KAN4, ATS | RNA biosynthesis.transcriptional activation.MYB... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01012707001 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01020718001 | No alias | RNA biosynthesis.transcriptional activation.MYB... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01025502001 | No alias | RNA biosynthesis.transcriptional activation.MYB... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01033381001 | No alias | RNA biosynthesis.transcriptional activation.MYB... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01033515001 | No alias | RNA biosynthesis.transcriptional activation.MYB... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_05533 | PHR1, AtPHR1 | PHR1 transcription factor involved in proline synthesis... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_08427 | KAN, KAN1 | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Gb_25991 | No alias | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Gb_25992 | No alias | G2-like GARP transcription factor | 0.05 | OrthoFinder output from all 47 species | |
| Gb_38388 | No alias | PHR1 transcription factor involved in proline synthesis... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g04640.1 | LOC_Os02g04640 | G2-like GARP transcription factor | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os02g07170.1 | LOC_Os02g07170 | G2-like GARP transcription factor | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os03g20900.1 | LOC_Os03g20900 | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g40960.1 | LOC_Os05g40960 | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os11g01480.1 | LOC_Os11g01480 | Putative Myb family transcription factor At1g14600... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os12g01490.1 | LOC_Os12g01490 | Putative Myb family transcription factor At1g14600... | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g32204 | KAN2 | KANADI-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_120020g0010 | No alias | G2-like GARP transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| MA_335624g0020 | No alias | G2-like GARP transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| MA_52379g0010 | No alias | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Mp3g04970.1 | KAN, KAN1 | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Mp4g01560.1 | No alias | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g18681 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g22383 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g24340 | PHL1 | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g25465 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g35324 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g38657 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g02133 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g09793 | PHR1, AtPHR1 | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g15270 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g05922 | No alias | transcription factor *(CLAUSA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g11277 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g12151 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g04161 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g11923 | KAN, KAN1 | KANADI-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g13922 | No alias | transcription factor *(CLAUSA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g22623 | KAN4, ATS | KANADI-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c12_10900V3.1 | Pp3c12_10900 | Homeodomain-like superfamily protein | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g29510 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g31777 | No alias | transcription factor *(CLAUSA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g39079 | KAN, KAN1 | KANADI-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g41633 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0013.g005961 | KAN3 | not classified & original description: CDS=52-843 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g12596 | No alias | transcription factor *(CLAUSA) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g15241 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g18907 | No alias | transcription factor *(CLAUSA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g22183 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g46631 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo270428 | PHR1, AtPHR1 | RNA biosynthesis.transcriptional activation.MYB... | 0.02 | OrthoFinder output from all 47 species | |
| Smo405704 | KAN4, ATS | RNA biosynthesis.transcriptional activation.MYB... | 0.03 | OrthoFinder output from all 47 species | |
| Smo423935 | No alias | RNA biosynthesis.transcriptional activation.MYB... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc02g076670.3.1 | Solyc02g076670 | Putative Myb family transcription factor At1g14600... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g006150.2.1 | Solyc03g006150 | Putative Myb family transcription factor At1g14600... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g079600.3.1 | KAN4, ATS, Solyc04g079600 | G2-like GARP transcription factor | 0.01 | OrthoFinder output from all 47 species | |
| Solyc05g055940.3.1 | PHL1, Solyc05g055940 | PHR1 transcription factor involved in proline synthesis... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc07g045000.4.1 | Solyc07g045000 | Putative Myb family transcription factor At1g14600... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc07g049640.3.1 | APL, WDY, Solyc07g049640 | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| Solyc10g083340.3.1 | Solyc10g083340 | G2-like GARP transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Solyc12g006280.3.1 | Solyc12g006280 | Putative Myb family transcription factor At1g14600... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc12g017370.3.1 | APL, WDY, Solyc12g017370 | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g04247 | No alias | GARP subgroup PHL transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
| Spa_g05502 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g24824 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g25153 | No alias | transcription factor *(CLAUSA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g01742 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e004125_P001 | Zm00001e004125 | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e014339_P001 | Zm00001e014339 | Putative Myb family transcription factor At1g14600... | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e030689_P002 | Zm00001e030689 | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e037731_P001 | APL, WDY, Zm00001e037731 | G2-like GARP transcription factor | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004411 | homogentisate 1,2-dioxygenase activity | IEP | HCCA |
| MF | GO:0004672 | protein kinase activity | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
| BP | GO:0006558 | L-phenylalanine metabolic process | IEP | HCCA |
| BP | GO:0006559 | L-phenylalanine catabolic process | IEP | HCCA |
| BP | GO:0006570 | tyrosine metabolic process | IEP | HCCA |
| BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008037 | cell recognition | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008483 | transaminase activity | IEP | HCCA |
| BP | GO:0009063 | amino acid catabolic process | IEP | HCCA |
| BP | GO:0009072 | aromatic amino acid metabolic process | IEP | HCCA |
| BP | GO:0009074 | aromatic amino acid family catabolic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| MF | GO:0015399 | primary active transmembrane transporter activity | IEP | HCCA |
| BP | GO:0016054 | organic acid catabolic process | IEP | HCCA |
| MF | GO:0016301 | kinase activity | IEP | HCCA |
| BP | GO:0016310 | phosphorylation | IEP | HCCA |
| MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | HCCA |
| MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016769 | transferase activity, transferring nitrogenous groups | IEP | HCCA |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| BP | GO:0019439 | aromatic compound catabolic process | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| MF | GO:0019842 | vitamin binding | IEP | HCCA |
| MF | GO:0030170 | pyridoxal phosphate binding | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044282 | small molecule catabolic process | IEP | HCCA |
| BP | GO:0046395 | carboxylic acid catabolic process | IEP | HCCA |
| BP | GO:0048544 | recognition of pollen | IEP | HCCA |
| MF | GO:0051213 | dioxygenase activity | IEP | HCCA |
| MF | GO:0070279 | vitamin B6 binding | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| BP | GO:1901361 | organic cyclic compound catabolic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901565 | organonitrogen compound catabolic process | IEP | HCCA |
| BP | GO:1901605 | alpha-amino acid metabolic process | IEP | HCCA |
| BP | GO:1901606 | alpha-amino acid catabolic process | IEP | HCCA |
| BP | GO:1902221 | erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process | IEP | HCCA |
| BP | GO:1902222 | erythrose 4-phosphate/phosphoenolpyruvate family amino acid catabolic process | IEP | HCCA |
| No external refs found! |