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  5. Zm00001e013560_P001

Zm00001e013560_P001 (RPS4, Zm00001e013560)


Aliases : RPS4, Zm00001e013560

Description : component psRPS4 of small ribosomal subunit proteome


Gene families : OG0007327 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007327_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e013560_P001

Target Alias Description ECC score Gene Family Method Actions
ATCG00380 RPS4 chloroplast ribosomal protein S4 0.06 OrthoFinder output from all 47 species
Aev_g09926 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g03663 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.09G048000.1 RPS4, Ceric.09G048000 component *(uS4c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Gb_06832 No alias component psRPS4 of small ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species
Gb_11360 RPS4 component psRPS4 of small ribosomal subunit proteome 0.02 OrthoFinder output from all 47 species
LOC_Os04g16738.1 RPS4, LOC_Os04g16738 component psRPS4 of small ribosomal subunit proteome 0.08 OrthoFinder output from all 47 species
LOC_Os04g16764.1 RPS4, LOC_Os04g16764 component psRPS4 of small ribosomal subunit proteome 0.08 OrthoFinder output from all 47 species
LOC_Os10g38214.1 RPS4, LOC_Os10g38214 component psRPS4 of small ribosomal subunit proteome 0.08 OrthoFinder output from all 47 species
Ore_g23778 RPS4 component *(uS4c) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Solyc00g500212.1.1 RPS4, Solyc00g500212 component psRPS4 of small ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species
Solyc11g022610.1.1 RPS4, Solyc11g022610 30S ribosomal protein S4, chloroplastic OS=Solanum... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0019843 rRNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002942 S4_RNA-bd 89 136
IPR001912 Ribosomal_S4/S9_N 4 88
No external refs found!