1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e013517_P001

Zm00001e013517_P001 (LPA2, Zm00001e013517)


Aliases : LPA2, Zm00001e013517

Description : LPA2 protein involved in PS-II assembly


Gene families : OG0007940 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007940_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e013517_P001
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AT5G51545 LPA2 low psii accumulation2 0.03 OrthoFinder output from all 47 species
Als_g10615 LPA2 protein involved in PS-II assembly *(LPA2) & original... 0.02 OrthoFinder output from all 47 species
Aop_g19683 LPA2 protein involved in PS-II assembly *(LPA2) & original... 0.08 OrthoFinder output from all 47 species
Cba_g09383 LPA2 protein involved in PS-II assembly *(LPA2) & original... 0.03 OrthoFinder output from all 47 species
Ceric.19G031300.1 LPA2, Ceric.19G031300 protein involved in PS-II assembly *(LPA2) & original... 0.05 OrthoFinder output from all 47 species
Cre02.g105650 No alias Photosynthesis.photophosphorylation.photosystem... 0.05 OrthoFinder output from all 47 species
Dcu_g02370 LPA2 protein involved in PS-II assembly *(LPA2) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01018558001 LPA2 Photosynthesis.photophosphorylation.photosystem... 0.04 OrthoFinder output from all 47 species
LOC_Os02g03250.1 LPA2, LOC_Os02g03250 LPA2 protein involved in PS-II assembly 0.08 OrthoFinder output from all 47 species
Ore_g14504 LPA2 protein involved in PS-II assembly *(LPA2) & original... 0.02 OrthoFinder output from all 47 species
Pp3c26_11240V3.1 Pp3c26_11240 low psii accumulation2 0.06 OrthoFinder output from all 47 species
Ppi_g62326 No alias protein involved in PS-II assembly *(LPA2) & original... 0.06 OrthoFinder output from all 47 species
Solyc03g083570.3.1 LPA2, Solyc03g083570 LPA2 protein involved in PS-II assembly 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!