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  5. Zm00001e013448_P001

Zm00001e013448_P001 (SKIP4, Zm00001e013448)


Aliases : SKIP4, Zm00001e013448

Description : F-box/kelch-repeat protein SKIP4 OS=Arabidopsis thaliana (sp|q9m2c9|skip4_arath : 207.0)


Gene families : OG0000469 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000469_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e013448_P001

Target Alias Description ECC score Gene Family Method Actions
Adi_g111859 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g14705 SKIP6 substrate adaptor *(SKIP6) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Aob_g00844 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Azfi_s0092.g043100 SKIP6 substrate adaptor *(SKIP6) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ceric.03G072000.1 Ceric.03G072000 not classified & original description: pacid=50571900... 0.02 OrthoFinder output from all 47 species
Ehy_g00813 SKIP4 substrate adaptor *(SKIP4) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Msp_g02030 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Pir_g35710 SKIP4 substrate adaptor *(SKIP4) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Pnu_g11479 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ppi_g30219 SKIP6 substrate adaptor *(SKIP6) of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Solyc04g051870.3.1 SKIP6, Solyc04g051870 F-box/kelch-repeat protein SKIP6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g02126 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Zm00001e000513_P002 Zm00001e000513 phenylpropanoid biosynthesis regulator (SAGL1) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR006652 Kelch_1 117 162
IPR001810 F-box_dom 28 66
No external refs found!