Aliases : Zm00001e013395
Description : component Sm-D3 of U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex
Gene families : OG0003441 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003441_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00001p00047670 | evm_27.TU.AmTr_v1... | RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... | 0.06 | OrthoFinder output from all 47 species | |
AT1G20580 | No alias | Small nuclear ribonucleoprotein family protein | 0.08 | OrthoFinder output from all 47 species | |
Adi_g022524 | No alias | component *(Sm-D3) of U1/U2/U4/U5-associated Sm... | 0.03 | OrthoFinder output from all 47 species | |
Adi_g024751 | No alias | component *(Sm-D3) of U1/U2/U4/U5-associated Sm... | 0.03 | OrthoFinder output from all 47 species | |
Als_g18634 | No alias | component *(Sm-D3) of U1/U2/U4/U5-associated Sm... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.09G101500.1 | Ceric.09G101500 | component *(Sm-D3) of U1/U2/U4/U5-associated Sm... | 0.06 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00020912.17 | No alias | RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... | 0.01 | OrthoFinder output from all 47 species | |
Dcu_g05211 | No alias | component *(Sm-D3) of U1/U2/U4/U5-associated Sm... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01023894001 | No alias | RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os02g01250.1 | LOC_Os02g01250 | component Sm-D3 of U1/U2/U4/U5-associated Sm accessory... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os03g13760.1 | LOC_Os03g13760 | component Sm-D3 of U1/U2/U4/U5-associated Sm accessory... | 0.03 | OrthoFinder output from all 47 species | |
Len_g36954 | No alias | component *(Sm-D3) of U1/U2/U4/U5-associated Sm... | 0.02 | OrthoFinder output from all 47 species | |
MA_98884g0010 | No alias | component Sm-D3 of U1/U2/U4/U5-associated Sm accessory... | 0.02 | OrthoFinder output from all 47 species | |
Mp1g11210.1 | No alias | component Sm-D3 of U1/U2/U4/U5-associated Sm accessory... | 0.02 | OrthoFinder output from all 47 species | |
Msp_g07432 | No alias | component *(Sm-D3) of U1/U2/U4/U5-associated Sm... | 0.04 | OrthoFinder output from all 47 species | |
Solyc02g062240.3.1 | Solyc02g062240 | component Sm-D3 of U1/U2/U4/U5-associated Sm accessory... | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005840 | ribosome | IEP | HCCA |
BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
BP | GO:0006486 | protein glycosylation | IEP | HCCA |
BP | GO:0006487 | protein N-linked glycosylation | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
CC | GO:0008250 | oligosaccharyltransferase complex | IEP | HCCA |
BP | GO:0009058 | biosynthetic process | IEP | HCCA |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
BP | GO:0019538 | protein metabolic process | IEP | HCCA |
BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
CC | GO:0034998 | oligosaccharyltransferase I complex | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
BP | GO:0043413 | macromolecule glycosylation | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
BP | GO:0070085 | glycosylation | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
CC | GO:0098796 | membrane protein complex | IEP | HCCA |
CC | GO:0140534 | endoplasmic reticulum protein-containing complex | IEP | HCCA |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
CC | GO:1902494 | catalytic complex | IEP | HCCA |
CC | GO:1990234 | transferase complex | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001163 | LSM_dom_euk/arc | 11 | 74 |
No external refs found! |