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  5. Zm00001e013253_P001

Zm00001e013253_P001 (Zm00001e013253)


Aliases : Zm00001e013253

Description : no hits & (original description: none)


Gene families : OG0006318 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006318_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e013253_P001

Target Alias Description ECC score Gene Family Method Actions
AT3G24080 No alias KRR1 family protein 0.03 OrthoFinder output from all 47 species
Aob_g18001 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g31844 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g02723 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.21G041100.1 Ceric.21G041100 not classified & original description: pacid=50602652... 0.05 OrthoFinder output from all 47 species
Cre10.g441450 No alias No description available 0.13 OrthoFinder output from all 47 species
Dac_g15847 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os05g41100.1 LOC_Os05g41100 no hits & (original description: none) 0.16 OrthoFinder output from all 47 species
Lfl_g30786 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp1g01270.1 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Mp5g13090.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Pnu_g08043 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g15524 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo409885 No alias No description available 0.07 OrthoFinder output from all 47 species
Solyc07g064350.3.1 Solyc07g064350 no hits & (original description: none) 0.14 OrthoFinder output from all 47 species
Tin_g01066 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003724 RNA helicase activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008186 ATP-dependent activity, acting on RNA IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
BP GO:0032259 methylation IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR018034 Kri1 344 441
IPR024626 Kri1-like_C 479 556
No external refs found!