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  5. Zm00001e013199_P003

Zm00001e013199_P003 (Zm00001e013199)


Aliases : Zm00001e013199

Description : G2-like GARP transcription factor


Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e013199_P003
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00151950 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
AMTR_s00095p00072210 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Aev_g07265 KAN2 KANADI-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g10098 PHL1 GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ala_g08342 KAN, KAN1 KANADI-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g09581 No alias transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g32729 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aob_g04205 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aob_g04221 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aob_g07262 KAN2 KANADI-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g27590 No alias transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.28G068700.1 Ceric.28G068700 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g23636 PHL1 GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dcu_g06121 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g17283 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dde_g26213 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01029458001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
Gb_17966 No alias G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Len_g15893 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Lfl_g01961 PHR1, AtPHR1 transcription factor *(PHR1) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g11028 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
MA_293791g0010 No alias Myb family transcription factor PHL7 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Mp3g04970.1 KAN, KAN1 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Mp4g08700.1 No alias G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Msp_g15811 No alias transcription factor *(CLAUSA) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g22383 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Nbi_g05367 KAN, KAN1 KANADI-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g24259 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g09762 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g26381 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pnu_g11923 KAN, KAN1 KANADI-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g41564 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sam_g08333 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sam_g08412 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sam_g14784 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sam_g40619 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Solyc08g076400.3.1 KAN2, Solyc08g076400 G2-like GARP transcription factor 0.04 OrthoFinder output from all 47 species
Spa_g05501 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Spa_g39146 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Spa_g57297 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Zm00001e001526_P001 Zm00001e001526 G2-like GARP transcription factor 0.04 OrthoFinder output from all 47 species
Zm00001e004125_P001 Zm00001e004125 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e035893_P001 Zm00001e035893 G2-like GARP transcription factor 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 328 378
IPR025756 Myb_CC_LHEQLE 414 461
No external refs found!