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  5. Zm00001e013110_P001

Zm00001e013110_P001 (Zm00001e013110)


Aliases : Zm00001e013110

Description : REIL LSU processome maturation factor


Gene families : OG0003289 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003289_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e013110_P001
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AT4G31420 No alias Zinc finger protein 622 0.03 OrthoFinder output from all 47 species
Adi_g019548 FZF LSU processome maturation factor *(REIL) & original... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020554.69 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
LOC_Os06g47840.1 LOC_Os06g47840 REIL LSU processome maturation factor 0.03 OrthoFinder output from all 47 species
Sam_g16513 No alias LSU processome maturation factor *(REIL) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR041661 ZN622/Rei1/Reh1_Znf-C2H2 178 279
No external refs found!