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  5. Zm00001e013057_P001

Zm00001e013057_P001 (NTMC2T1.3, SYT3,...)


Aliases : NTMC2T1.3, SYT3, NTMC2TYPE1.3, ATSYTC, SYTC, Zm00001e013057

Description : endoplasmic reticulum-plasma membrane tethering protein (SYTa/b/c)


Gene families : OG0000213 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000213_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e013057_P001
Cluster HCCA: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0199.g057481 SYT5, NTMC2T2.1,... not classified & original description: CDS=93-1391 0.02 OrthoFinder output from all 47 species
Dac_g16761 NTMC2TYPE4, NTMC2T4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01025699001 NTMC2T1.3, SYT3,... Synaptotagmin-3 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os06g47130.1 NTMC2T1.3, SYT3,... endoplasmic reticulum-plasma membrane tethering protein... 0.02 OrthoFinder output from all 47 species
MA_10435546g0010 SYT5, NTMC2T2.1,... Synaptotagmin-5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g02454 SYT5, NTMC2T2.1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g17254 SYT5, NTMC2T2.1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g30145 NTMC2T1.2, SYTB,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0092.g018914 NTMC2TYPE4, NTMC2T4 not classified & original description: CDS=254-1720 0.02 OrthoFinder output from all 47 species
Sam_g21473 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc09g007860.4.1 NTMC2T1.3, SYT3,... endoplasmic reticulum-plasma membrane tethering protein... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR000008 C2_dom 418 518
IPR000008 C2_dom 260 352
IPR039010 Synaptotagmin_SMP 66 247
No external refs found!