Zm00001e012973_P001 (RGTA2, ATRGTA2, Zm00001e012973)

Aliases : RGTA2, ATRGTA2, Zm00001e012973

Description : subunit alpha of RAB-GTPase geranylgeranyltransferase (RGT) complex

Gene families : OG0004280 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004280_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e012973_P001

Target	Alias	Description	ECC score	Gene Family Method
Dcu_g03999	ATRGTA1, RGTA1	EC_2.5 transferase transferring alkyl or aryl group,...	0.02	OrthoFinder output from all 47 species
Dde_g21998	ATRGTA1, RGTA1	EC_2.5 transferase transferring alkyl or aryl group,...	0.02	OrthoFinder output from all 47 species
Gb_29233	ATRGTA1, RGTA1	subunit alpha of RAB-GTPase geranylgeranyltransferase...	0.02	OrthoFinder output from all 47 species
LOC_Os06g46380.1	RGTA2, ATRGTA2,...	subunit alpha of RAB-GTPase geranylgeranyltransferase...	0.03	OrthoFinder output from all 47 species
Len_g17135	ATRGTA1, RGTA1	EC_2.5 transferase transferring alkyl or aryl group,...	0.02	OrthoFinder output from all 47 species
Spa_g09072	ATRGTA1, RGTA1	EC_2.5 transferase transferring alkyl or aryl group,...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004659	prenyltransferase activity	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008318	protein prenyltransferase activity	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	None	Extended
BP	GO:0018342	protein prenylation	IEA	Interproscan
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0097354	prenylation	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004177	aminopeptidase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0008233	peptidase activity	IEP	HCCA
MF	GO:0008238	exopeptidase activity	IEP	HCCA
MF	GO:0008963	phospho-N-acetylmuramoyl-pentapeptide-transferase activity	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016780	phosphotransferase activity, for other substituted phosphate groups	IEP	HCCA
MF	GO:0030145	manganese ion binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002088	Prenyl_trans_a	207	232
IPR002088	Prenyl_trans_a	126	150
IPR002088	Prenyl_trans_a	89	114
IPR002088	Prenyl_trans_a	161	188

External Links

No external refs found!