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  5. Zm00001e012873_P001

Zm00001e012873_P001 (CEN2, Zm00001e012873)


Aliases : CEN2, Zm00001e012873

Description : DNA repair protein (CEN2). centrin component CEN of TREX-2 mRNP trafficking complex


Gene families : OG0001195 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001195_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e012873_P001

Target Alias Description ECC score Gene Family Method Actions
AT4G37010 CEN2 centrin 2 0.03 OrthoFinder output from all 47 species
Als_g42645 CEN2 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g24143 CEN2 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os03g53200.1 ACAM-6, CAM6,... Calmodulin-like protein 4 OS=Oryza sativa subsp.... 0.1 OrthoFinder output from all 47 species
LOC_Os10g25010.1 CEN2, LOC_Os10g25010 DNA repair protein (CEN2). centrin component CEN of... 0.03 OrthoFinder output from all 47 species
Lfl_g28485 CEN2 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Mp4g22970.1 CEN2 Caltractin OS=Scherffelia dubia (sp|q06827|catr_schdu : 129.0) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 35 97
IPR002048 EF_hand_dom 108 171
No external refs found!