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  5. Zm00001e012782_P002

Zm00001e012782_P002 (SS2, AtSS2, Zm00001e012782)


Aliases : SS2, AtSS2, Zm00001e012782

Description : starch synthase (SSII)


Gene families : OG0001429 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001429_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e012782_P002
Cluster HCCA: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
Ceric.14G059800.1 SS2, AtSS2,... not classified & original description: pacid=50634171... 0.04 OrthoFinder output from all 47 species
Dcu_g04935 SS2, AtSS2 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g01990 SSI1, ATSS1, SSI EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Mp4g16940.1 SS2, AtSS2 starch synthase (SSII) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
InterPro domains Description Start Stop
IPR001296 Glyco_trans_1 586 732
IPR013534 Starch_synth_cat_dom 284 526
No external refs found!