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  5. Zm00001e012419_P002

Zm00001e012419_P002 (Zm00001e012419)


Aliases : Zm00001e012419

Description : VAN3-binding protein OS=Arabidopsis thaliana (sp|q8w4k5|vab_arath : 140.0)


Gene families : OG0001358 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001358_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e012419_P002
Cluster HCCA: Cluster_179

Target Alias Description ECC score Gene Family Method Actions
AT3G63300 FKD1 FORKED 1 0.03 OrthoFinder output from all 47 species
AT4G32780 No alias phosphoinositide binding 0.02 OrthoFinder output from all 47 species
AT5G43870 No alias Plant protein of unknown function (DUF828) with plant... 0.03 OrthoFinder output from all 47 species
Ala_g12666 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07023 FKD1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08241 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0001.g000245 No alias not classified & original description: CDS=137-1642 0.03 OrthoFinder output from all 47 species
Dac_g12672 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g19722 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g51479 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01035642001 No alias VAN3-binding protein OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Len_g20147 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10432316g0010 No alias VAN3-binding protein OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Ppi_g15899 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0056.g014535 No alias not classified & original description: CDS=1-1842 0.02 OrthoFinder output from all 47 species
Solyc09g065590.3.1 Solyc09g065590 VAN3-binding protein OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g14997 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g09364 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e002903_P001 Zm00001e002903 VAN3-binding protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013666 PH_pln 357 388
IPR008546 VAN3-bd-like_auxin_canal 19 295
No external refs found!