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  5. Zm00001e012414_P003

Zm00001e012414_P003 (VPS2.2, Zm00001e012414)


Aliases : VPS2.2, Zm00001e012414

Description : component VPS2/CHMP2 of ESCRT-III complex


Gene families : OG0003140 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003140_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e012414_P003

Target Alias Description ECC score Gene Family Method Actions
AT5G44560 VPS2.2 SNF7 family protein 0.03 OrthoFinder output from all 47 species
Ehy_g23957 VPS2.2 component *(VPS2/CHMP2) of ESCRT-III complex & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01037973001 VPS2.2 Vesicle trafficking.endomembrane trafficking.ESCRT... 0.08 OrthoFinder output from all 47 species
Lfl_g38407 VPS2.3 component *(VPS2/CHMP2) of ESCRT-III complex & original... 0.03 OrthoFinder output from all 47 species
Pp3c3_2240V3.1 VPS2.3, Pp3c3_2240 vacuolar protein sorting-associated protein 2.3 0.02 OrthoFinder output from all 47 species
Sam_g30316 No alias component *(VPS2/CHMP2) of ESCRT-III complex & original... 0.06 OrthoFinder output from all 47 species
Solyc02g069680.3.1 VPS2.2, Solyc02g069680 component VPS2/CHMP2 of ESCRT-III complex 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR005024 Snf7_fam 18 185
No external refs found!