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  5. Zm00001e012408_P002

Zm00001e012408_P002 (PHB-1D, ATHB-14, PHB,...)


Aliases : PHB-1D, ATHB-14, PHB, ATHB14, Zm00001e012408

Description : transcription factor (HD-ZIP III)


Gene families : OG0000446 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000446_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e012408_P002
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00148p00033940 PHB-1D, ATHB-14,... RNA biosynthesis.transcriptional activation.HB... 0.05 OrthoFinder output from all 47 species
AMTR_s00155p00069240 PHB-1D, ATHB-14,... RNA biosynthesis.transcriptional activation.HB... 0.04 OrthoFinder output from all 47 species
AT1G52150 ICU4, ATHB15,... Homeobox-leucine zipper family protein / lipid-binding... 0.05 OrthoFinder output from all 47 species
AT5G60690 IFL1, IFL, REV Homeobox-leucine zipper family protein / lipid-binding... 0.03 OrthoFinder output from all 47 species
Adi_g089464 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g11870 PHB-1D, ATHB-14,... transcriptional co-regulator *(ZPR) & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g31988 HB-8, ATHB8, ATHB-8 HD-ZIP III-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07212 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g09861 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Als_g14341 HB-8, ATHB8, ATHB-8 transcriptional co-regulator *(ZPR) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g20866 PHB-1D, ATHB-14,... HD-ZIP III-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g06100 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36277.t1 ICU4, ATHB15,... transcriptional co-regulator *(ZPR) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene40226.t1 ICU4, ATHB15,... transcriptional co-regulator *(ZPR) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene47508.t1 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0121.g046826 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g06986 HB-8, ATHB8, ATHB-8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g22007 HB-8, ATHB8, ATHB-8 transcriptional co-regulator *(ZPR) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g22860 PHB-1D, ATHB-14,... HD-ZIP III-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g23262 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g32595 PHB-1D, ATHB-14,... transcriptional co-regulator *(ZPR) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g43873 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g59635 ICU4, ATHB15,... transcriptional co-regulator *(ZPR) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.17G020900.1 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.17G083000.1 ICU4, ATHB15,... transcriptional co-regulator *(ZPR) & original... 0.04 OrthoFinder output from all 47 species
Ceric.18G068400.1 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ceric.23G045900.1 ICU4, ATHB15,... transcriptional co-regulator *(ZPR) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g27410 PHB-1D, ATHB-14,... HD-ZIP III-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g31340 PHB-1D, ATHB-14,... HD-ZIP III-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01017010001 ICU4, ATHB15,... RNA biosynthesis.transcriptional activation.HB... 0.1 OrthoFinder output from all 47 species
GSVIVT01025193001 IFL1, IFL, REV RNA biosynthesis.transcriptional activation.HB... 0.11 OrthoFinder output from all 47 species
GSVIVT01035612001 ICU4, ATHB15,... RNA biosynthesis.transcriptional activation.HB... 0.1 OrthoFinder output from all 47 species
Gb_02083 ICU4, ATHB15,... transcription factor (HD-ZIP III) 0.04 OrthoFinder output from all 47 species
Gb_18240 ICU4, ATHB15,... transcription factor (HD-ZIP III) 0.04 OrthoFinder output from all 47 species
LOC_Os03g01890.1 IFL1, IFL, REV,... transcription factor (HD-ZIP III) 0.09 OrthoFinder output from all 47 species
LOC_Os03g43930.1 PHB-1D, ATHB-14,... transcription factor (HD-ZIP III) 0.09 OrthoFinder output from all 47 species
LOC_Os12g41860.1 PHB-1D, ATHB-14,... transcription factor (HD-ZIP III) 0.04 OrthoFinder output from all 47 species
Len_g19010 ICU4, ATHB15,... transcriptional co-regulator *(ZPR) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g26487 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_10427484g0010 ICU4, ATHB15,... transcription factor (HD-ZIP III) 0.04 OrthoFinder output from all 47 species
MA_107764g0010 ICU4, ATHB15,... no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_19520g0020 ICU4, ATHB15,... transcription factor (HD-ZIP III) 0.03 OrthoFinder output from all 47 species
Mp1g24140.1 HB-8, ATHB8, ATHB-8 transcription factor (HD-ZIP III) 0.05 OrthoFinder output from all 47 species
Msp_g02849 ICU4, ATHB15,... transcriptional co-regulator *(ZPR) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26097 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g05442 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g03892 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g28374 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g09911 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g02329 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0103.g019961 PHB-1D, ATHB-14,... component *(uL11) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0123.g021492 HB-8, ATHB8, ATHB-8 not classified & original description: CDS=1-1650 0.02 OrthoFinder output from all 47 species
Sam_g12564 No alias HD-ZIP III-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Sam_g39110 No alias HD-ZIP III-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Solyc02g024070.3.1 PHB-1D, ATHB-14,... transcription factor (HD-ZIP III) 0.04 OrthoFinder output from all 47 species
Solyc03g120910.4.1 ICU4, ATHB15,... transcription factor (HD-ZIP III) 0.03 OrthoFinder output from all 47 species
Solyc08g066500.4.1 ICU4, ATHB15,... transcription factor (HD-ZIP III) 0.04 OrthoFinder output from all 47 species
Solyc12g044410.2.1 ICU4, ATHB15,... transcription factor (HD-ZIP III) 0.1 OrthoFinder output from all 47 species
Spa_g05254 ICU4, ATHB15,... transcriptional co-regulator *(ZPR) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g08598 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g49880 ICU4, ATHB15,... transcriptional co-regulator *(ZPR) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e025995_P002 ICU4, ATHB15,... transcription factor (HD-ZIP III) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008289 lipid binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
InterPro domains Description Start Stop
IPR002913 START_lipid-bd_dom 178 385
IPR001356 Homeobox_dom 30 87
IPR013978 MEKHLA 713 855
No external refs found!