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  5. Zm00001e012388_P001

Zm00001e012388_P001 (YAB5, Zm00001e012388)


Aliases : YAB5, Zm00001e012388

Description : transcription factor (YABBY)


Gene families : OG0002690 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002690_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e012388_P001
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00165390 YAB2,... RNA biosynthesis.transcriptional activation.C2C2... 0.04 OrthoFinder output from all 47 species
AMTR_s00047p00199030 CRC,... RNA biosynthesis.transcriptional activation.C2C2... 0.06 OrthoFinder output from all 47 species
AMTR_s00085p00032940 AFO, YAB1, FIL,... RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
AMTR_s00096p00054100 YAB5,... RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
AT1G23420 INO Plant-specific transcription factor YABBY family protein 0.04 OrthoFinder output from all 47 species
AT1G69180 CRC Plant-specific transcription factor YABBY family protein 0.02 OrthoFinder output from all 47 species
AT2G26580 YAB5 plant-specific transcription factor YABBY family protein 0.02 OrthoFinder output from all 47 species
GSVIVT01012246001 CRC RNA biosynthesis.transcriptional activation.C2C2... 0.04 OrthoFinder output from all 47 species
GSVIVT01022586001 YAB2 RNA biosynthesis.transcriptional activation.C2C2... 0.04 OrthoFinder output from all 47 species
LOC_Os07g06620.2 YAB2, LOC_Os07g06620 transcription factor (YABBY) 0.02 OrthoFinder output from all 47 species
LOC_Os10g36420.1 AFO, YAB1, FIL,... transcription factor (YABBY) 0.03 OrthoFinder output from all 47 species
LOC_Os12g42610.1 YAB5, LOC_Os12g42610 transcription factor (YABBY) 0.05 OrthoFinder output from all 47 species
MA_407206g0010 YAB5 transcription factor (YABBY) 0.04 OrthoFinder output from all 47 species
Solyc01g010240.3.1 CRC, Solyc01g010240 transcription factor (YABBY) 0.04 OrthoFinder output from all 47 species
Solyc01g091010.3.1 AFO, YAB1, FIL,... transcription factor (YABBY) 0.08 OrthoFinder output from all 47 species
Solyc05g005240.2.1 INO, Solyc05g005240 transcription factor (YABBY) 0.02 OrthoFinder output from all 47 species
Solyc07g008180.4.1 YAB5, Solyc07g008180 transcription factor (YABBY) 0.07 OrthoFinder output from all 47 species
Solyc08g079100.3.1 AFO, YAB1, FIL,... transcription factor (YABBY) 0.1 OrthoFinder output from all 47 species
Solyc11g071810.2.1 YAB2, Solyc11g071810 transcription factor (YABBY) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007275 multicellular organism development IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR006780 YABBY 12 79
No external refs found!