Aliases : Zm00001e012278
Description : RNA chaperone (RZ1|GR-RBP)
Gene families : OG0000073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000073_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00012p00103290 | evm_27.TU.AmTr_v1... | Organelle RRM domain-containing protein 2, mitochondrial... | 0.02 | OrthoFinder output from all 47 species | |
AT3G26420 | ATRZ-1A | RNA-binding (RRM/RBD/RNP motifs) family protein with... | 0.03 | OrthoFinder output from all 47 species | |
AT5G04280 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein with... | 0.03 | OrthoFinder output from all 47 species | |
Adi_g108265 | No alias | RNA chaperone *(RZ1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g35268 | CCR2, ATGRP7,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0008.g011258 | CCR2, ATGRP7,... | not classified & original description: CDS=99-740 | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0345.g065814 | GR-RBP3 | not classified & original description: CDS=194-694 | 0.03 | OrthoFinder output from all 47 species | |
Ceric.1Z053200.1 | ATRZ-1A, Ceric.1Z053200 | RNA chaperone *(RZ1) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.30G044500.1 | Ceric.30G044500 | RNA chaperone *(RZ1) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
Cre02.g079400 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
Cre09.g392350 | GRP2, ATGRP2, GR-RBP2 | Glycine-rich RNA-binding protein 2, mitochondrial... | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g45667 | GRP2, ATGRP2, GR-RBP2 | RNA editing factor *(ORRM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g52563 | CCR2, ATGRP7,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os03g47800.1 | ATRZ-1A, LOC_Os03g47800 | RNA chaperone (RZ1|GR-RBP) | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os08g04440.1 | LOC_Os08g04440 | RNA editing factor (ORRM) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os10g17454.1 | GR-RBP3, LOC_Os10g17454 | RNA editing factor (ORRM) | 0.02 | OrthoFinder output from all 47 species | |
Len_g07508 | No alias | RNA chaperone *(RZ1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Lfl_g25551 | GRP2, ATGRP2, GR-RBP2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
MA_10428777g0010 | CCR2, ATGRP7,... | Glycine-rich RNA-binding protein GRP1A OS=Sinapis alba... | 0.03 | OrthoFinder output from all 47 species | |
MA_10436424g0010 | ATRZ-1A | RNA chaperone (RZ1|GR-RBP) | 0.03 | OrthoFinder output from all 47 species | |
Pir_g12344 | GRP2, ATGRP2, GR-RBP2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g06069 | GRP2, ATGRP2, GR-RBP2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g33002 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Solyc01g104840.4.1 | ATRZ-1A, Solyc01g104840 | RNA chaperone (RZ1|GR-RBP) | 0.04 | OrthoFinder output from all 47 species | |
Solyc05g053780.4.1 | GRP2, ATGRP2,... | RNA chaperone (RZ1|GR-RBP). RNA editing factor (ORRM) | 0.03 | OrthoFinder output from all 47 species | |
Solyc11g008210.3.1 | Solyc11g008210 | Glycine-rich RNA-binding protein RZ1B OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
Tin_g27808 | GR-RBP4, GRP4 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Tin_g30660 | GR-RBP3 | RNA ediTing factor *(ORRM3) & original description: none | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
No external refs found! |