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  5. Zm00001e012273_P001

Zm00001e012273_P001 (FdC1, Zm00001e012273)


Aliases : FdC1, Zm00001e012273

Description : Ferredoxin C 2, chloroplastic OS=Arabidopsis thaliana (sp|q9c7y4|fdc2_arath : 215.0)


Gene families : OG0007770 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007770_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e012273_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00150380 FdC1,... Ferredoxin C 2, chloroplastic OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT1G32550 FdC1 2Fe-2S ferredoxin-like superfamily protein 0.15 OrthoFinder output from all 47 species
Adi_g043788 FdC1 ferredoxin targeted to non-NADP reduction & original... 0.07 OrthoFinder output from all 47 species
Ala_g06893 FdC1 ferredoxin targeted to non-NADP reduction & original... 0.02 OrthoFinder output from all 47 species
Aob_g00791 FdC1 ferredoxin targeted to non-NADP reduction & original... 0.06 OrthoFinder output from all 47 species
Aspi01Gene42540.t1 FdC1, Aspi01Gene42540 ferredoxin targeted to non-NADP reduction & original... 0.02 OrthoFinder output from all 47 species
Cba_g20079 FdC1 ferredoxin targeted to non-NADP reduction & original... 0.04 OrthoFinder output from all 47 species
Ceric.13G044700.1 FdC1, Ceric.13G044700 ferredoxin targeted to non-NADP reduction & original... 0.05 OrthoFinder output from all 47 species
Dac_g00249 FdC1 ferredoxin targeted to non-NADP reduction & original... 0.04 OrthoFinder output from all 47 species
Dcu_g00557 FdC1 ferredoxin targeted to non-NADP reduction & original... 0.05 OrthoFinder output from all 47 species
Ehy_g02045 FdC1 ferredoxin targeted to non-NADP reduction & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01013191001 FdC1 Ferredoxin C 2, chloroplastic OS=Arabidopsis thaliana 0.17 OrthoFinder output from all 47 species
LOC_Os03g48040.1 FdC1, LOC_Os03g48040 Ferredoxin C 2, chloroplastic OS=Arabidopsis thaliana... 0.13 OrthoFinder output from all 47 species
Lfl_g02653 FdC1 ferredoxin targeted to non-NADP reduction & original... 0.03 OrthoFinder output from all 47 species
Mp2g18370.1 FdC1 Ferredoxin C 2, chloroplastic OS=Arabidopsis thaliana... 0.09 OrthoFinder output from all 47 species
Ore_g04929 FdC1 ferredoxin targeted to non-NADP reduction & original... 0.05 OrthoFinder output from all 47 species
Pir_g10671 FdC1 ferredoxin targeted to non-NADP reduction & original... 0.04 OrthoFinder output from all 47 species
Pnu_g00351 FdC1 ferredoxin targeted to non-NADP reduction & original... 0.05 OrthoFinder output from all 47 species
Ppi_g18540 FdC1 ferredoxin targeted to non-NADP reduction & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0026.g009549 FdC1 ferredoxin targeted to non-NADP reduction & original... 0.05 OrthoFinder output from all 47 species
Solyc08g077050.3.1 FdC1, Solyc08g077050 Ferredoxin C 2, chloroplastic OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g00162 FdC1 ferredoxin targeted to non-NADP reduction & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEA Interproscan
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001041 2Fe-2S_ferredoxin-type 80 148
No external refs found!