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  5. Zm00001e011908_P001

Zm00001e011908_P001 (ATCUL4, CUL4, Zm00001e011908)


Aliases : ATCUL4, CUL4, Zm00001e011908

Description : scaffold component CUL4 of CUL4-DDB1 ubiquitination complexes. scaffold component (CUL4) of CUL4-DDB1 ubiquitination complex


Gene families : OG0000920 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000920_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e011908_P001

Target Alias Description ECC score Gene Family Method Actions
Adi_g058112 ATCUL4, CUL4 scaffold component *(CUL4) of CUL4-DDB1 ubiquitination... 0.02 OrthoFinder output from all 47 species
Aev_g15218 ATCUL4, CUL4 scaffold component *(CUL4) of CUL4-DDB1 ubiquitination... 0.02 OrthoFinder output from all 47 species
Ala_g02559 ATCUL4, CUL4 scaffold component *(CUL4) of CUL4-DDB1 ubiquitination... 0.02 OrthoFinder output from all 47 species
Als_g06802 ATCUL4, CUL4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g29144 ATCUL4, CUL4 scaffold component *(CUL4) of CUL4-DDB1 ubiquitination... 0.02 OrthoFinder output from all 47 species
Aspi01Gene12486.t1 ATCUL4, CUL4,... scaffold component *(CUL4) of CUL4-DDB1 ubiquitination... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000157.110 ATCUL4, CUL4 Cullin-4 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020563.190 ATCUL4, CUL4 Cullin-4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020934.33 CUL3B, ATCUL3B Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 47 species
Lfl_g02234 ATCUL4, CUL4 scaffold component *(CUL4) of CUL4-DDB1 ubiquitination... 0.02 OrthoFinder output from all 47 species
Msp_g05342 ATCUL4, CUL4 scaffold component *(CUL4) of CUL4-DDB1 ubiquitination... 0.04 OrthoFinder output from all 47 species
Spa_g26765 ATCUL4, CUL4 scaffold component *(CUL4) of CUL4-DDB1 ubiquitination... 0.03 OrthoFinder output from all 47 species
Tin_g01191 ATCUL4, CUL4 scaffold component *(CUL4) of CUL4-DDB1 ubiquiTination... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
MF GO:0031625 ubiquitin protein ligase binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001373 Cullin_N 135 732
IPR019559 Cullin_neddylation_domain 763 822
No external refs found!