- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : Zm00001e011788
Description : E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica (sp|q6avn2|sirp1_orysj : 164.0)
Gene families : OG0000101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000101_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G26800 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT1G55530 | No alias | RING/U-box superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| AT3G10815 | No alias | RING/U-box superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT4G26400 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G64920 | CIP8 | COP1-interacting protein 8 | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g018009 | ATCRT1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g019629 | No alias | RING-H2-class BTL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g082947 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g088761 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g04007 | No alias | RING-H2-class BTL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g04888 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g03741 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g05465 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g14925 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g44017 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0149.g053204 | No alias | RING-H2-class BTL-subclass E3 ubiquitin ligase &... | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0230.g059174 | No alias | not classified & original description: CDS=1-867 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g03836 | No alias | RING-H2-class BTL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g05833 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.06G020800.1 | Ceric.06G020800 | RING-H2-class BTL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.07G095600.1 | Ceric.07G095600 | not classified & original description: pacid=50626992... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.32G049400.1 | Ceric.32G049400 | not classified & original description: pacid=50598110... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g46359 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g03388 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g08256 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g01134 | No alias | RING-H2-class BTL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01015309001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g01200.1 | LOC_Os06g01200 | E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os07g43740.1 | LOC_Os07g43740 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g11310 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Mp7g15970.1 | No alias | E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g25986 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g43938 | No alias | RING-H2-class BTL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g11583 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g03871 | No alias | RING-H2-class BTL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g20916 | No alias | RING-H2-class BTL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g23014 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g37435 | No alias | RING-H2-class BTL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g11253 | No alias | RING-H2-class BTL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g61153 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g06797 | No alias | RING-H2-class BTL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g56162 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0036.g011589 | No alias | not classified & original description: CDS=1-987 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0039.g012146 | No alias | not classified & original description: CDS=1-969 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0040.g012286 | No alias | not classified & original description: CDS=1-1674 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g09427 | No alias | RING-H2-class BTL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g27709 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc05g007895.1.1 | Solyc05g007895 | E3 ubiquitin-protein ligase MPSR1 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g074460.3.1 | CIP8, Solyc09g074460 | E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g14660 | No alias | RING-H2-class BTL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g20368 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g26018 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0061630 | ubiquitin protein ligase activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| No external refs found! |