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  5. Zm00001e011647_P002

Zm00001e011647_P002 (RPN5B, Zm00001e011647)


Aliases : RPN5B, Zm00001e011647

Description : regulatory component RPN5 of 26S proteasome


Gene families : OG0003644 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003644_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e011647_P002
Cluster HCCA: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00018620 RPN5B,... Protein degradation.26S proteasome.regulatory... 0.05 OrthoFinder output from all 47 species
AT5G09900 EMB2107, MSA, RPN5A 26S proteasome regulatory subunit, putative (RPN5) 0.12 OrthoFinder output from all 47 species
Adi_g060241 RPN5B regulatory component *(RPN5) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Adi_g082898 EMB2107, MSA, RPN5A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g30391 RPN5B regulatory component *(RPN5) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Als_g12273 RPN5B regulatory component *(RPN5) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Aob_g01383 RPN5B regulatory component *(RPN5) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Aop_g13431 RPN5B regulatory component *(RPN5) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Azfi_s0081.g038574 RPN5B regulatory component *(RPN5) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Ceric.10G039600.1 RPN5B, Ceric.10G039600 regulatory component *(RPN5) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Ceric.1Z048700.1 RPN5B, Ceric.1Z048700 regulatory component *(RPN5) of 26S proteasome &... 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021348.57 RPN5B Protein degradation.26S proteasome.regulatory... 0.07 OrthoFinder output from all 47 species
Cre14.g632775 RPN5B Protein degradation.26S proteasome.regulatory... 0.12 OrthoFinder output from all 47 species
Ehy_g03758 RPN5B regulatory component *(RPN5) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
GSVIVT01022276001 RPN5B Protein degradation.26S proteasome.regulatory... 0.03 OrthoFinder output from all 47 species
Gb_00178 EMB2107, MSA, RPN5A regulatory component RPN5 of 26S proteasome 0.07 OrthoFinder output from all 47 species
Gb_00179 RPN5B regulatory component RPN5 of 26S proteasome 0.03 OrthoFinder output from all 47 species
LOC_Os03g63430.1 RPN5B, LOC_Os03g63430 regulatory component RPN5 of 26S proteasome 0.11 OrthoFinder output from all 47 species
Lfl_g28889 RPN5B regulatory component *(RPN5) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
MA_10427293g0010 RPN5B regulatory component RPN5 of 26S proteasome 0.04 OrthoFinder output from all 47 species
Mp6g06620.1 RPN5B regulatory component RPN5 of 26S proteasome 0.12 OrthoFinder output from all 47 species
Nbi_g08616 RPN5B regulatory component *(RPN5) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Ore_g37416 RPN5B regulatory component *(RPN5) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Pnu_g12287 RPN5B regulatory component *(RPN5) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Pp3c10_9730V3.1 RPN5B, Pp3c10_9730 26S proteasome regulatory subunit, putative (RPN5) 0.02 OrthoFinder output from all 47 species
Sam_g11859 No alias regulatory component *(RPN5) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Sam_g24935 No alias regulatory component *(RPN5) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Solyc04g012040.3.1 RPN5B, Solyc04g012040 regulatory component RPN5 of 26S proteasome 0.04 OrthoFinder output from all 47 species
Solyc04g051370.4.1 RPN5B, Solyc04g051370 regulatory component RPN5 of 26S proteasome 0.08 OrthoFinder output from all 47 species
Spa_g09767 RPN5B regulatory component *(RPN5) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004298 threonine-type endopeptidase activity IEP HCCA
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0070003 threonine-type peptidase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR040896 RPN5_C 409 438
IPR000717 PCI_dom 292 399
No external refs found!