1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e011585_P002

Zm00001e011585_P002 (ATRBP45C, Zm00001e011585)


Aliases : ATRBP45C, Zm00001e011585

Description : mRNA-binding regulatory factor (RBP45/47)


Gene families : OG0000531 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000531_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e011585_P002

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00247520 evm_27.TU.AmTr_v1... Polyadenylate-binding protein RBP47B OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00157p00079360 ATRBP47C',... Polyadenylate-binding protein RBP47C OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00157p00080130 ATRBP47B,... Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia 0.03 OrthoFinder output from all 47 species
Als_g07576 No alias regulatory factor *(RBP45/47) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020780.17 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.01 OrthoFinder output from all 47 species
Gb_26951 ATRBP45C mRNA-binding regulatory factor (RBP45/47) 0.03 OrthoFinder output from all 47 species
LOC_Os04g37690.1 ATRBP47C',... mRNA-binding regulatory factor (RBP45/47) 0.03 OrthoFinder output from all 47 species
Lfl_g33868 ATRBP45C regulatory factor *(RBP45/47) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
MA_29443g0010 ATRBP45C mRNA-binding regulatory factor (RBP45/47) 0.03 OrthoFinder output from all 47 species
Ore_g34352 No alias regulatory factor *(RBP45/47) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Pir_g06468 No alias regulatory factor *(RBP45/47) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 303 367
IPR000504 RRM_dom 204 272
IPR000504 RRM_dom 92 158
No external refs found!