1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e011518_P001

Zm00001e011518_P001 (ERD4, Zm00001e011518)


Aliases : ERD4, Zm00001e011518

Description : calcium-permeable channel (OSCA)


Gene families : OG0000264 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000264_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e011518_P001

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020816.39 No alias No description available 0.01 OrthoFinder output from all 47 species
GSVIVT01012531001 HYP1, ATHYP1 Solute transport.channels.OSCA calcium-permeable channel 0.05 OrthoFinder output from all 47 species
LOC_Os03g51620.1 RXW8, LOC_Os03g51620 calcium-permeable channel (OSCA) 0.03 OrthoFinder output from all 47 species
Lfl_g09013 No alias calcium-permeable channel *(OSCA) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g32668 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.02 OrthoFinder output from all 47 species
MA_47699g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pnu_g21616 No alias calcium-permeable channel *(OSCA) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02297 No alias calcium-permeable channel *(OSCA) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g06692 No alias calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g07938 HYP1, ATHYP1 calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e020766_P002 Zm00001e020766 calcium-permeable channel (OSCA) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015693 magnesium ion transport IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR003864 CSC1/OSCA1-like_7TM 372 642
IPR027815 CSC1/OSCA1-like_cyt 195 361
IPR032880 Csc1/OSCA1-like_N 5 172
No external refs found!