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  5. Zm00001e011508_P001

Zm00001e011508_P001 (NCED3, SIS7, STO1,...)


Aliases : NCED3, SIS7, STO1, ATNCED3, Zm00001e011508

Description : neoxanthin cleavage protein


Gene families : OG0000239 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000239_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e011508_P001

Target Alias Description ECC score Gene Family Method Actions
AT3G24220 NCED6, ATNCED6 nine-cis-epoxycarotenoid dioxygenase 6 0.03 OrthoFinder output from all 47 species
Adi_g107187 ATCCD1, CCD1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g21663 ATNCED9, NCED9 EC_1.13 oxidoreductase acting on single donor with... 0.04 OrthoFinder output from all 47 species
Dde_g30650 ATNCED9, NCED9 EC_1.13 oxidoreductase acting on single donor with... 0.04 OrthoFinder output from all 47 species
Gb_14132 NCED3, SIS7,... Enzyme classification.EC_1 oxidoreductases.EC_1.13... 0.04 OrthoFinder output from all 47 species
Pir_g61521 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Solyc05g053530.1.1 NCED6, ATNCED6,... neoxanthin cleavage protein 0.03 OrthoFinder output from all 47 species
Tin_g15475 NCED3, SIS7,... EC_1.13 oxidoreductase acTing on single donor with... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004619 phosphoglycerate mutase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006007 glucose catabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019320 hexose catabolic process IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046365 monosaccharide catabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 1 418
No external refs found!