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  5. Zm00001e011273_P001

Zm00001e011273_P001 (Zm00001e011273)


Aliases : Zm00001e011273

Description : CDK5RAP1-like protein OS=Oryza sativa subsp. japonica (sp|q2r1u4|ck5p1_orysj : 969.0)


Gene families : OG0006702 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006702_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e011273_P001
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
AT4G36390 No alias Methylthiotransferase 0.09 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021521.24 No alias CDK5RAP1-like protein OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
GSVIVT01018858001 No alias CDK5RAP1-like protein OS=Arabidopsis thaliana 0.13 OrthoFinder output from all 47 species
Gb_31461 No alias CDK5RAP1-like protein OS=Oryza sativa subsp. japonica... 0.07 OrthoFinder output from all 47 species
LOC_Os11g38030.1 LOC_Os11g38030 CDK5RAP1-like protein OS=Oryza sativa subsp. japonica... 0.13 OrthoFinder output from all 47 species
Mp3g13110.1 No alias CDK5RAP1-like protein OS=Oryza sativa subsp. japonica... 0.06 OrthoFinder output from all 47 species
Solyc02g084750.4.1 Solyc02g084750 CDK5RAP1-like protein OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Tin_g06058 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0035596 methylthiotransferase activity IEA Interproscan
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
MF GO:0051539 4 iron, 4 sulfur cluster binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0051920 peroxiredoxin activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013848 Methylthiotransferase_N 88 200
IPR002792 TRAM_dom 498 572
IPR007197 rSAM 248 444
No external refs found!