Zm00001e010541_P001 (Zm00001e010541)


Aliases : Zm00001e010541

Description : histone demethylase (KDM3)


Gene families : OG0000328 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000328_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e010541_P001

Target Alias Description ECC score Gene Family Method Actions
AT4G00990 No alias Transcription factor jumonji (jmjC) domain-containing protein 0.03 OrthoFinder output from all 47 species
Adi_g010140 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g015324 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g020581 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g086368 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g086474 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g112855 No alias auxiliary component *(JMJ24) of COMPASS histone... 0.02 OrthoFinder output from all 47 species
Adi_g113340 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g11281 No alias histone demethylase *(KDM3) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g16847 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g51504 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54566 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05543 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g19024 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g70469 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene13978.t1 Aspi01Gene13978 histone demethylase *(KDM3) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene40711.t1 Aspi01Gene40711 histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene40712.t1 Aspi01Gene40712 histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0100.g044279 No alias histone demethylase *(KDM3) & original description: CDS=159-2921 0.03 OrthoFinder output from all 47 species
Cba_g04079 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05973 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g31854 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g14457 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g16289 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g05376 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g12667 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g18399 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09266 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09272 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17375 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g21794 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os03g31594.1 LOC_Os03g31594 histone demethylase (KDM3). transcription factor (JUMONJI) 0.02 OrthoFinder output from all 47 species
Len_g08738 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g23792 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g50090 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g04275 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g35782 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40363 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g16206 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g13618 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25616 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g45466 No alias histone demethylase *(KDM3) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g41007 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04006 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05933 No alias histone demethylase *(KDM3) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g41358 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007136 No alias histone demethylase *(KDM3) & original description: CDS=210-2957 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0110.g020614 No alias histone demethylase *(KDM3) & original description: CDS=1-3996 0.04 OrthoFinder output from all 47 species
Sam_g17510 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g28431 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29418 No alias auxiliary component *(JMJ24) of COMPASS histone... 0.04 OrthoFinder output from all 47 species
Sam_g29690 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g083240.4.1 Solyc03g083240 histone demethylase (KDM3). transcription factor (JUMONJI) 0.02 OrthoFinder output from all 47 species
Solyc04g049140.4.1 IBM1, Solyc04g049140 histone demethylase (KDM3). transcription factor (JUMONJI) 0.03 OrthoFinder output from all 47 species
Solyc08g065800.1.1 Solyc08g065800 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Tin_g10184 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
CC GO:0000152 nuclear ubiquitin ligase complex IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
CC GO:0005680 anaphase-promoting complex IEP HCCA
BP GO:0007346 regulation of mitotic cell cycle IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
BP GO:0030071 regulation of mitotic metaphase/anaphase transition IEP HCCA
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0033044 regulation of chromosome organization IEP HCCA
BP GO:0033045 regulation of sister chromatid segregation IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0051983 regulation of chromosome segregation IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901987 regulation of cell cycle phase transition IEP HCCA
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP HCCA
BP GO:1902099 regulation of metaphase/anaphase transition of cell cycle IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR014977 WRC_dom 229 264
IPR018866 Znf-4CXXC_R1 370 435
No external refs found!